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Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences
Published by Universitas Brawijaya
ISSN : 20875517     EISSN : 25274376     DOI : -
Core Subject : Agriculture, Social,
Agriculture, Biological Sciences & Forestry Environmental Science
The Journal of Tropical Life Science (JTLS) provides publication of full-length papers, short communication and review articles describing of new finding or theory in living system, cells and molecular level in tropical life science and related areas. The journal publishes articles that report novel findings of wide Tropical Life system phenomenon in the areas of biodiversity, agriculture, fisheries, health, husbandry, forestry and environmental technology. JTLS has 1 volume with 3 issues per year.
Arjuna Subject : -
Articles 1,001 Documents
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Agronomical Performances of Gajah Mungkur Mutant Rice Varieties Under Drought Stress: Agronomical Performances of Gajah Mungkur Mutant Rice Varieties Rahmawati, Dwi; Dewi, Azri Kusuma; Mufikasari, Venti Yanti; Wilujeng, Elly Daru; Adnan, Moch. Rosyadi
Journal of Tropical Life Science Vol. 14 No. 1 (2024)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.14.01.08

Abstract

The productivity of the rice plant is commonly influenced by both genotype and environmental factors. One common environmental factor that leads to harvest failure is drought, often caused by low rainfall. Therefore, the development of drought-tolerant varieties should be implemented to obtain optimum productivity under an unfavorable environment. One of the canonical approaches for achieving this is genetic manipulation, such as by gamma radiation-induced mutation. This study aimed to determine the drought tolerance and quantitative characteristics of mutant rice varieties generated from gamma radiation. The methodology used was a split-plot design with two factors, including drought as the first factor consisting of three groups namely control, mid-level, and high-level. The second factor was rice genotypes, which consisted of six genotypes comprising PMG 07/PsJ, PMG 08/ PsJ, and PMG 09/ PsJ (mutant varieties), Gajah Mungkur (parental background), Limboto (drought-tolerant), and IR 20 (drought-susceptible). The data were statistically examined using Analysis of Variance (ANOVA) and further analyzed with Duncan’s Multiple Range Test (DMRT) with a significance level of 5%. The results showed that high-level drought significantly affected plant height during both the vegetative and mature stages. Among the mutants, PMG 08/PsJ exhibited better vegetative growth under dry conditions, retaining a relatively higher height. Drought also had a negative impact on the number of tillers and productive tillers. The PMG 08/PsJ mutant had a slightly higher number of tillers under drought cultivations. On the other hand, PMG 09/PsJ was found to have a relatively more filled grain number per panicle. Leaf rolling and dryness index showed similar trends in all varieties, while drought treatments imposed a delay on the flowering and harvesting age. Although the results demonstrated no substantial improvement over the parental lines, the selected mutant lines provided several beneficial agronomical features such as maintenance of plant height, tiller number, and shorter life cycles under severe drought. These characteristics could serve as valuable genetic resources for breeding programs focused on developing drought-resistant rice varieties for challenging environments.
Therapeutic Potential of Malaysian Stingless Bee Propolis Extract Targeting Macrophages in Atherogenesis: A Review: Therapeutic Potential of Malaysian Stingless Bee Propolis Extract Aziz, Mohd Yusmaidie; Omar, Eshaifol Azam; Zulkafli, Nor Effa Syazuli; Mohamed, Rafeezul
Journal of Tropical Life Science Vol. 14 No. 1 (2024)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.14.01.17

Abstract

Propolis is a sticky substance that originates from the collection of plant saps and resins by stingless bees. The bees blend this material with pollen and wax flakes, and their salivary fluids combine with the mixture to produce a potent compound that contains various chemical constituents, such as flavonoids and phenolic compounds. Numerous studies have revealed that propolis from stingless bees displays anti-inflammatory, antioxidant, immunomodulatory, and cardioprotective properties. Geniotrigona thoracica is one of the Malaysian stingless bee species, and propolis from this species is composed of a wide array of biochemical compounds and antioxidant properties that may have an anti-atherogenic effect. This review highlights the possible role of propolis from the Malaysian stingless bee G. thoracica as a macrophage-targeted therapeutic in atherogenesis, as macrophage-derived foam cell formation is integral to the development of atherosclerosis. The review first describes the characteristics, chemical content, and antioxidant properties of propolis from G. thoracica. It then discusses the pathogenesis of atherosclerosis, with a focus on macrophage-derived foam cell formation. Subsequently, the anti-atherosclerotic effects of propolis from G. thoracica are presented, and recent studies on the anti-atherosclerotic effects of propolis from honeybees worldwide are summarized for comparison. Finally, future perspectives are emphasized, highlighting the knowledge gaps that need to be investigated by researchers in this field.
Genome-Wide Analysis of GATA Transcription Factor Family in Quinoa (Chenopodium quinoa): Identification, Characterization, and Expression Profiles: Genome Survey of the GATA Transcription Factor in Quinoa Le, Thi Man; La, Hong Viet; Chu, Ha Duc; Pham, Chau Thuy; Ha, Quyen Thi; Le, Thi Ngoc Quynh; Tran, Thi Thanh Huyen; Tran, Van Tien; Dong, Huy Gioi; Pham, Minh Hong; Tran, Vinh Thanh; Chu, Thi Bich Ngoc; Cao, Phi Bang
Journal of Tropical Life Science Vol. 14 No. 2 (2024)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.14.02.02

Abstract

GATA-binding factor (GATA) proteins are the transcription factor (TF) family that are commonly involved in plant growth and development. The GATA TF family has been successfully identified and characterized for various higher plant species, but there is little research on the GATA TF family in quinoa (Chenopodium quinoa). In this present study, a total of 32 CqGATA genes were identified and analyzed in the quinoa genome. While the general features of the CqGATA TFs in quinoa were slightly variable, the majority of genes encoding the CqGATA TFs contained two and three exons. Our phylogenetic analysis demonstrated that the CqGATA TFs could be classified into four different groups. Gene expression analysis indicated that the expression profiles of the CqGATA genes varied in different tissues. Overall, our study could provide a reference for further functional characterization of the CqGATA genes in quinoa.
Identification of Two Enzymes for Trehalose Synthesis and Their Potential Function in Growth and Development in Peanut (Arachis hypogaea): Genome Analysis of the Encoding Trehalose Synthesis Enzymes in Peanut Chu, Ha Duc; Tran, Yen Thi Hai; Pham, Chau Thuy; Le, Thi Ngoc Quynh; Tran, Thi Thanh Huyen; Nguyen, Trung Quoc; Dong, Huy Gioi; Tran, Van Tien; Cao, Phi Bang
Journal of Tropical Life Science Vol. 14 No. 1 (2024)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.14.01.10

Abstract

Plant trehalose has been regarded to play a key role in various biological processes during the growth and development stages. Trehalose-6-phosphate synthase (TPS) and trehalose-6-phosphate phosphatase (TPP) are two important enzymes for the synthesis of plant trehalose. Up till now, the TPS and TPP gene families have been identified and characterized in numerous higher plant species, but are rarely recorded in peanuts (Arachis hypogaea). In this study, a comprehensive search was performed to identify all putative TPS and TPP proteins in the peanut genome using Arabidopsis TPS and TPP proteins as queries. We then analyzed the characteristics of TPS and TPP members, including physic-chemical parameters, subcellular localization, phylogeny relationships, gene duplication, and expression patterns by various computational tools. As a result, a total of 17 ArahyTPS and 15 ArahyTPP genes were identified and annotated in the peanut genome, which was expanded by segmental duplication events. Our Neighbor-Joining based phylogenetic tree indicated that the ArahyTPS and ArahyTPP proteins could be categorized into three and two major branches. Gene structures and protein features analysis exhibited that the ArahyTPS and ArahyTPP proteins shared high structural and functional similarities. Based on previous RNA-Seq datasets, a majority of the ArahyTPS and ArahyTPP genes were found to specifically express in at least one major organ/tissue during the growth and development. This work will not only lead to a solid foundation on reveal the potential roles of ArahyTPS and ArahyTPP gene families in peanuts but also provide evidence to related trehalose research in other higher plant species.
Molecular Docking and Pharmacokinetics Analysis of Phytochemicals from Piper caninum as Dengue NS2B-NS3 Protease Inhibitors: Evaluation of Phytochemicals as Inhibitor for NS2B-NS3 Mustafa, Nur Farhana; Cheng, Kian Kai; Razali, Siti Aisyah; Nadri, Muhammad Helmi
Journal of Tropical Life Science Vol. 14 No. 1 (2024)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.14.01.14

Abstract

Dengue fever affects 390 million people each year. Currently, there is no specific medicine to treat this disease. Thus, the search for potential NS2B-NS3 protease inhibitors has attracted increasing research interest. The dengue protease NS2B-NS3 was used as a molecular target because of its vital function in viral replication. Piper caninum belongs to the Piperaceae family, found inhabited in Malaysia and Indonesia. This plant possesses various phytochemicals with various health benefits. However, the anti-dengue activity of this plant is yet to be discovered. Therefore, the objective of this research is to evaluate the inhibitory activity of phytochemicals from P. caninum against NS2B-NS3 using in silico experimentation. Molecular docking using AutoDock Vina was utilized to identify the binding interaction of phytochemicals on NS2B-NS3. SwissADME and ProTox-II web servers were used to analyse the ADMET (absorption, distribution, metabolism, excretion, and toxicity) of the phytochemicals. Results showed that cepharadione A, bornyl caffeate, and (+)-bornyl p-coumarate had comparable molecular interaction with the reference compound, curcumin. Analysis of in silico pharmacokinetics properties revealed that these phytochemicals have good pharmacokinetics profiles and excellent drug-ability, which obeyed Lipinski’s Rule of Five. This study shows the potential inhibitory activity of the phytochemicals against NS2B-NS3 for a lead in the development of dengue inhibitors.
A Preliminary Survey on Geospatial Distribution of Aedes albopictus and Aedes aegypti Mosquitoes Found in Different Urban and Rural Locations of Southern West Bengal, India: Distribution of Aedes mosquitoes in Southern West Bengal, India Majumdar , Anasuya; Mahata , Amit; Bag, Shampa
Journal of Tropical Life Science Vol. 14 No. 1 (2024)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.14.01.12

Abstract

Aedes mosquitoes are globally known to transmit various arboviral diseases including Dengue fever. Historically considered an urban disease, Dengue fever has been reported in rural areas of different countries also. Two important species, Aedes aegypti, and Aedes albopictus, are rapidly spreading and invading new locations in India and risking human health more frequently each year. Since vector control has been proven to be the most effective measure to prevent such disease, knowing the vectors more, would help design successful methods to fight against the disease. In this survey, a cross-sectional inspection was conducted to look for the existence of Aedes spp. at 420 locations including urban and rural areas of 15 districts in Southern West Bengal, India, Morphological identification of collected specimens, comparative analyses of vector distribution and their breeding habitats, between districts, rural and urban locations as well as between different physiographic regions in this area were performed. The study revealed that sixty-four percent of the urban locations inspected and 22% of the rural locations inspected were positive for Aedes spp. Despite the region’s physiographic, climatic, and anthropogenic diversity, the districts shared a similar pattern of species distribution - A. albopictus was found in both rural and urban locations of all the districts while A. aegypti was observed in only urban locations of thirteen districts.  In some locations, both species were found to be co-existing in the same habitat containers. Mean larval density and mean container index were both higher in urban habitats than in rural areas though few rural locations showed significantly high density of larval population. The current findings of this survey thus provide a comprehensive picture of Aedes distribution in the said area and may in turn act as a foundation for more effective surveillance to characterize these vectors and to identify potential dengue outbreak hotspots in Southern West Bengal.
Botanical Origin and Extraction Methods of Philippine Stingless Bee (Tetragonula biroi Friese) Pollen and its Food Functionality: Phenolic and Flavonoid Content and Antioxidant Activity: Philippine Stingless Bee Pollen Food Functionality Deocaris, Custer; Salcedo, Fernando; Sullivan, Carly; Micor, Jose Rene; Alinsug, Malona; Mojica, Elmer-Rico E
Journal of Tropical Life Science Vol. 14 No. 1 (2024)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.14.01.07

Abstract

With its high nutritional and bioactive content, bee pollen is recognized as a functional food. However, its composition is highly dependent on a range of factors, such as geographical location. In this research, we used DPPH to determine the antioxidant activity of several stingless bee (Tetragonula biroi) pollen samples sourced from five different areas in the Philippines and compare their phenolic and flavonoid content.  Additionally, we compared two extraction methods: maceration (or soaking of samples) for three days and sonication for 30 minutes. Interestingly, our findings show that the phenolic content of bee pollen is weakly associated with antioxidant activity, indicating that other bioactive chemicals may play a more significant part in the antioxidant characteristics of bee pollen.  Antioxidant properties based on the DPPH assay of pollen harvested from Calamba are higher compared to other samples from different geographic areas, i.e., Quezon Province, Sorsogon, Laguna, and Albay. When compared to the maceration approach, extracts generated from the sonication process had lower antioxidant activity. These findings suggest that Philippine stingless bee pollen is a potential source of bioactive compounds, and the choice of extraction method and geographic source are significant factors affecting its antioxidant activity.
The Impact of Some Vitamins and Minerals Supplements on Type 2 Diabetes (T2DM) Management: The Dietary Supplements in T2DM Management Musafer, Karar Nadhum Jawad; Kamal Mohammed, Amera; Chobok, Ali Sabah; AL-Mousawi, Masar Riyadh Rashid; Fahrul Huyop; Tahreer M. Al-Thuwaini
Journal of Tropical Life Science Vol. 14 No. 2 (2024)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.14.02.01

Abstract

A chronic metabolic condition, type 2 diabetes mellitus (T2DM) typically presents with hyperglycemia owing to elevated tissue insulin resistance or inadequate insulin release. In addition to the use of pharmaceutical agents and lifestyle changes for the management of T2DM, supplementation with various vitamins and minerals has also been proven to be of benefit. The objective of the present research was to establish the effectiveness of vitamin B12, vitamin C, selenium, and chromium as adjunctive therapy given over 120 days in diminishing insulin resistance. In total, 32 individuals (16 men and 16 women) living with diabetes were enrolled in the study. Fasting blood glucose (FBG), glycated hemoglobin (HbA1c), serum insulin concentrations, and homeostatic model assessment of insulin resistance (HOMA-IR) were quantified at baseline and on day 120 of supplementation. Mean FBG and HbA1c levels and insulin concentrations all decreased, i.e. 185.11 ± 22.67 mg/dL vs. 163.57 ± 19.31 mg/dL (P = 0.02), 8.47 ± 0.52% vs. 7.80 ± 0.48% (P = 0.003), and 23.15 ± 3.87 vs. 15.85 ± 1.46 (P = 0.02), respectively. HOMA-IR values remained unchanged. The association between therapy and clinical features was examined using logistic regression analysis. In the subjects with T2DM, FBG, and HbA1c levels were diminished by a factor of 2. It was concluded that vitamin and mineral supplementation was of benefit with respect to glycemic parameters. Nevertheless, high-quality evidence that supports the efficacy of such substances to improve glucose homeostasis and insulin resistance in individuals with T2DM in a clinical setting is lacking
Acceleration of Organic Compost Supply Using Microbial Consortium Formulation on Various Organic Wastes and their Effect on Sweet Corn: Acceleration of Organic Compost Supply Using Microbial Consortium Formulation Tyasmoro, Setyono Yudo; Saitama, Akbar; zulfikar, Aji
Journal of Tropical Life Science Vol. 14 No. 2 (2024)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.14.02.12

Abstract

Organic waste, primarily originating from agricultural sources, remains underutilized in Indonesia, despite its substantial potential as an organic fertilizer. Consequently, it is imperative to comprehend the technology capable of efficiently decomposing organic matter and yielding high-quality compost. This study aimed to investigate the impact of a microbial consortium comprising Bacillus sp., Pseudomonas sp., Trichoderma sp., and Aspergillus sp. on the decomposition of organic waste derived from rice, sugarcane, corn and as well as to examine its application to sweet-corn (Zea mays var. saccharata). The study used a factorial randomized block design, featuring two primary factors, compost types and their respective doses. This design in total of nine treatments, each replicated three times, thus resulting in a sum of 27 experimental units. The treatments were RSC: Rice straw compost; SLC: Sugarcane leaves compost; CHC: Corn husk compost; D7.5: Compost dose of 7.5 t ha-1; D15: Compost dose of 15 t ha-1; D22.5: Compost dose of 22.5 t ha-1.  Moreover, an essential fertilizer, NPK, was applied at a rate of 200 kg/ha. The findings demonstrated a substantial impact of both compost types and doses on maize growth parameters, which encompassed plant height, leaf area, chlorophyll contentand dry weight. These effects were observed individually, without any interactions between the two factors. Furthermore, these treatments exhibited a discernible influence on corn yield. The highest to lowest yields were recorded as follows: CHC (9.29 t ha-1), RSC (8.72 t ha-1), and SLC (8.00 t ha-1). Combining organic compost with chemical fertilizer effectively prevented nutrient loss through denitrification and evaporation, facilitating nutrient retention and controlled release over time.
The Role of Mycorrhizae on the Growth of Banana Planlets of Cultivar Raja (Musa Paradisiaca C.V. Raja) from Bali at Post Acclimatization: Role of Mycorrhizae on the Growth of Banana Planlets Dwiyani, Rindang; Wirya, Gusti Ngurah Alit Susanta; Gunadi, I Gusti Alit; Darmawati, Ida Ayu Putri; Yuswanti, Hestin; Susrusa, Ketut Budi; AStiningsih, Ana Agung Made
Journal of Tropical Life Science Vol. 14 No. 2 (2024)
Publisher : Journal of Tropical Life Science

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.11594/jtls.14.02.11

Abstract

The effect of inoculation of a combination of the arbuscular mycorrhizal fungus of Glomus and Acaulospora on micropropagated banana plantlets cultivar Raja from Bali during the acclimatization phase was investigated. The experiment was conducted at the Experimental Station of the Faculty of Agriculture, Udayana University, Denpasar, Bali, Indonesia, over the period of March to June 2022. The objective of this research was to evaluate the impact of various doses of mycorrhizae on the growth of tissue culture banana plantlets that had undergone acclimatization for a period of six weeks. A total of five different doses of mycorrhiza were applied to the acclimatized plantlets, namely M0=without mycorrhiza and M5=5g mycorrhiza.kg-1, M10=10 g mycorrhiza.kg-1, M15=15 g mycorrhiza.kg-1, M20=20 g mycorrhiza.kg-1. A significant effect was discovered at M15; however, compared to M20, M20 gave better results for root length and fresh weight of the above-ground part, indicating the best dose was 20 g mycorrhiza kg-1. This study concluded that mycorrhiza has a very significant role in supporting the growth of micro propagated banana plantlets at post-acclimatization. Variables observed, such as the average number of leaves, stem diameter, above-ground plant fresh and dry weight, and root fresh and dry weight, increased with the application of AMF (Glomus and Acaulospora).

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