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ILMU KELAUTAN: Indonesian Journal of Marine Sciences
Published by Universitas Diponegoro
ISSN : 08537291     EISSN : 24067598     DOI : -
Core Subject : Science,
Earth & Planetary Sciences
ILMU KELAUTAN: Indonesian Journal of Marine Sciences (IJMS) is dedicated to published highest quality of research papers and review on all aspects of marine biology, marine conservation, marine culture, marine geology and oceanography.
Arjuna Subject : -
Articles 743 Documents
 64   65   66   67   68 
A Review: Classification, Chemical Compositions and Antioxidant Properties of Red, Brown and Green Macroalgae Nguyen, Ngoc Trang Thuy; Tran, Thanh Men
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 29, No 3 (2024): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14710/ik.ijms.29.3.340-350

Abstract

In human body, free radicals cause oxidative stress which is reported to be the main reason of  many life style human diseases. This stress induced by the imbalance of antioxidants and oxidants. Many deadly diseases induced by oxidative stress as it forms the root cause of several degenerative changes in the cells and tissues. Nucleic acids, lipids and proteins in our body are demaged by this stress, made changes to cellular functions and lead to apoptosis or necrosis. Antioxidants have an important role in protection human body from oxidative damages and prevention of many chronic diseases, for example, diabetes, cardiovascular disease, aging, even diseases related to the nervous system. Currently, the exploration of natural antioxidants is trends in the pharmaceutical industries because synthetic antioxidants are reported to cause major side effects. Antioxidants of natural origin are considered safe and highly effective. These substances are abundant in many medicinal herbs including algae, fungi, plants and animals. Among them, seaweed is believed to be a potential source of medicinal herbs capable of synthesizing compounds with good biological activity. Off these, macroalgae, including red, brown, and green macroalgae,  are considered a natural source of antioxidant components that can provide a valuable contribution to the innovation of pharmaceutical and industrial fields. Since algal products' antioxidant properties and nutritional benefits have been increasingly recognized, their properties as antioxidants require further investigative studies. This review provides information on various aspects of antioxidants, including algal sources containing antioxidants, the chemical composition of macroalgae, and antioxidant components, as well as their benefits to human health.
Effects of Different Solvents on the Antioxidant Activity of Several Seaweed Species from Semporna, Sabah, Malaysia Hamid, Mansoor Abdul; Yeap, Chi Hong; Mustapha, Wan Aida Wan; Martony, Oslida; Fatmawati, Fatmawati
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 29, No 1 (2024): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14710/ik.ijms.29.1.29-36

Abstract

Sabah is the main seaweed producer in Malaysia especially red seaweeds which are commercially cultivated for the production of food gum known as carrageenan. Seaweeds are also high in phytochemical such as antioxidant compounds.  Three seaweeds species from the Semporna Seawater, Sabah, namely Kappaphycus alvarezii, Caulerpa lentillifera and Sargassum polycystum were chosen for this study for the analysis of their antioxidant activities.  K. alvarezii species is commercially cultivated whereas the other two (C. lentillifera and S. polycystum) are wild species.  All seaweeds species underwent drying process in a cabinet dryer prior to the analyses.  Six types of solvents which were water, ethanol, methanol, chloroform, ethyl acetate and hexane were used for the extraction process. Every concentrated, extracted solutions were then measured for their antioxidant activities based on total phenolic content (TPC), diphenylpicrylhydrazyl (DPPH) radical scavenging activity, ferric reducing antioxidant power (FRAP) and β-carotene bleaching assay. Results showed that TPC of S. polycystum was significantly higher (p<0.05) than K. alvarezii but not significantly different (P>0.05) from C. lentillifera. Even though the extraction yield of water was the highest, but the greatest antioxidant activity values were seen in methanolic extraction in comparison to the other solvents in TPC, DPPH and FRAP. This indicated that most of the antioxidant compounds in all the three seaweed samples are polar. However, high antioxidant activity in terms of β-carotene bleaching assay were seen in other solvent extractions, which were chloroform, hexane and ethyl acetate. This indicated that seaweed also contain non-polar antioxidant compounds such as β-carotene. Overall, the best extraction method of antioxidant compounds in seaweed samples was using methanol as the extractant.
Vertical and Horizontal Variability of Chlorophyll-a and Its Relationship with Environmental Parameters in the Waters of Sangihe and Talaud Islands, North Sulawesi, Indonesia Firdaus, Mochamad Ramdhan; Rachman, Arief; Fitriya, Nurul; Wijayanti, Lady Ayu Sri; Rozirwan, Rozirwan; Purwandana, Adi; Prayitno, Hanif Budi; Alfiansyah, Yustian Rovi; Sianturi, Oksto Ridho; Sugeha, Hagi Yulia
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 29, No 1 (2024): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14710/ik.ijms.29.1.119-132

Abstract

The chlorophyll-a is an important biological parameter that could act as a proxy to indicate the abundance of phytoplankton and the primary productivity of an aquatic ecosystem. This paper investigates the vertical and horizontal variability of chlorophyll-a in the waters of Sangihe and Talaud Islands, Indonesia, and its correlation with water environmental parameters. In this study, the distribution of chlorophyll-a, temperature, salinity, and nutrients (NO3 and PO4) from the surface to a depth of 200 m (photic zone) was measured at 29 research stations. The results showed that the distribution of chlorophyll-a in the waters of the Sangihe-Talaud Islands was varied vertically and horizontally. The waters around the Sangihe Islands generally exhibited a higher chlorophyll-a distribution and shallower Deep Chlorophyll Maxima compared to the water around the Talaud Islands. The concentration of chlorophyll-a varied between 0.0017 and 1.2155 mg.m-3, with most of the water column in Sangihe-Talaud considered oligotrophic, although some stations or depths were mesotrophic or slightly eutrophic. The maximum chlorophyll-a concentration was found in the sub-surface layer at depths between 46 and 101 m. The low N:P ratio (<16) and N:Si ratio (<1) indicate that the water columns of Sangihe-Talaud, up to a depth of 200m, were N-limited. Based on the GAM analysis, chlorophyll-a concentration in Sangihe-Talaud waters was primarily regulated by temperature, salinity, and the N:P ratio, with weak influence from phosphate and the N:Si ratio. The analysis also suggests that primary productivity in Sangihe-Talaud is sensitive to temperature changes, indicating its vulnerability to future warming events.
Effect of Planting Media Modification on Seed Growth and Development of Three Mangroves Species from Jakarta and Kebumen, Indonesia Ardli, Erwin Riyanto; Hanifah, Wahdini; Prabowo, Romanus Edy; Nafis, Bayu Ashila; Widyartini, Dwi Sunu
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 29, No 2 (2024): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14710/ik.ijms.29.2.285-292

Abstract

The rehabilitation of mangroves depends on the availability of high-quality, sufficiently prominent seeds. Currently, a lot of mangrove nursery activities continue to employ traditional techniques, which results in low-quality and slowly growing seedlings. The mangroves of Jakarta were selected because they represent a heavily polluted mangrove ecosystem on Java's northern coast, whereas the mangroves in Kebumen, on Java's southern coast, are in the opposite situation. This study proposed to find an approach to supply Indonesia's mangrove restoration projects with adequate seeds. An experimental approach with a complete randomized design and a factorial pattern was used. The variables tested were planting media and three kinds of mangroves: Rhizophora mucronata, Ceriops tagal, and Bruguiera gymnorrhiza. Mangroves from Jakarta are treated with mud, soil media, or a mix of them. A mixture of mud, husk, and husk charcoal is used for six treatments planting media for mangroves from Kebumen. The mangrove seedlings' growth, biomass, and chlorophyll content are the dependent variables. ANOVA was used to evaluate the data with a 95% confidence level, and Duncan's comparison of means test followed. The growth of mangrove seedlings was discovered to be impacted by media type, while the chlorophyll content, dry biomass of roots, stems, and leaves were not affected by this factor. Three species of mangroves differ regarding growth rate, biomass of roots, stems, and leaves, and chlorophyll content. In order to support Indonesia's efforts to rehabilitate mangroves, this research can offer understanding regarding how to select and employ the best media to effectively produce high-quality seeds.
Observed Anomaly of Temperature and Mixed Layer Depth Associated with the Madden Julian Oscillation (MJO) Active Phase in the Banda Sea, Indonesia Nabil, Nabil; Atmadipoera, Agus Saleh; Nugroho, Dwiyoga; Naulita, Yuli; Koch-Larrouy, Ariane
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 28, No 4 (2023): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14710/ik.ijms.28.4.369-382

Abstract

The eastward propagation of atmospheric waves along the equatorial band from the central equatorial Indian Ocean to the western Pacific Ocean passing through the Indonesian Maritime Continent (IMC), known as the intraseasonal Madden Julian Oscillation (MJO) event, plays an important role on modulating both atmospheric and upper ocean dynamics along its path. This study aims to investigate the MJO active phase dynamics and its impact on changes in near-surface seawater temperature and mixed layer depth (MLD) anomaly in the Banda Sea Indonesia, using multi-datasets of atmospheric reanalysis, satellites derived sea surface temperature (SST), and Argo float between 2017 - 2018. This study revealed that the MJO waves propagate eastward along the southern equator-line over the IMC and pass through the Banda Sea, associated with significant decreased on Outgoing Longwave Radiation (OLR) and increased in zonal wind speed at 850hPa. The study result shows anomalous increased on surface wind speed and SST cooling during of MJO active phase. The amplitude peaks of filtered ocean-atmosphere variables range between 30 – 60 days. Argo float datasets in the Banda Sea for the first time captured upper ocean responses to the arrival of the MJO active phase, as characterized by a negative temperature anomaly of ~0.3°C in the surface mixed layer, large temperature anomaly of ~0.8°C in the thermocline layer and the deepening of the MLD of ~25 m. Hence, the MJO active phase impacts significantly on surface and vertical temperature cooling and regulate upper ocean mixing intensity in the Banda Sea.
Seasonal Constellation of Juvenile Whale Sharks in Gorontalo Bay Coastal Park Yasir, Moh.; Hartati, Retno; Indrayanti, Elis; Amar, Fahri; Tarigan, Ariyo Imanuel
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 29, No 2 (2024): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14710/ik.ijms.29.2.241-253

Abstract

The whale shark (Rhincodon typus Smith, 1828) is the largest extant fish species in the world, and it is endangered, with population numbers declining in the last three decades. The appearance of whale sharks in the Botubarani Waters has attracted a lot of attention. Therefore, this study aimed to determine the whale shark's appearance, their habitat constellation pattern, and its oceanographic conditions. This research was conducted during the 2019-2022 period. The Photographic Identification (Photo-ID) method is used to observe and determine whale shark individual's number and pattern of presence. Oceanographic data includes chlorophyll-a concentration using Ocean Color Image (CCI) data and sea surface temperature (SST) using OSTIA image data processed with Interactive Data Language (IDL) software. The research showed there are 38 individuals with an estimated total length ranging from 2.3 to 7.3 meters. All whale sharks appearing in Botubarani include juvenile male individuals with a composition of 53% new individuals (N=20) and 47% (N=18) old individuals seen again with a rare seasonal and sporadic presence pattern mainly in the Eastern season (June). The average SST value during the study period ranged from 28.36-30.29⁰C while chlorophyll-a ranged from 0.174-0.698 mg.m-3. Although the present findings show that the whale shark's appearance in Botubarani waters was not significantly influenced by SST and chlorophyll-a, it might be affected by other oceanography factors such as Sea Surface Height Distribution (SSHD) and depth (Bathymetry). As the Botubarani aggregation site is the only whale shark emergence area with easy access throughout the year and is rapidly developing into a new ecotourism industry in Indonesia; the information on whale shark appearance provides useful support for the sustainable protection and Whale Sharks conservation in the future.
Antibacterial compounds derived from marine Streptomyces aureofaciens A3 through in-silico molecular docking Srikandace, Yoice; Syani, Ira Rhabbiyatun; Wahhaab, Aisha; Kamarisima, Kamarisima; Putri, Sastia Prama; Aditiawati, Pingkan
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 29, No 3 (2024): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14710/ik.ijms.29.3.403-413

Abstract

Streptomyces aureofaciens widely produces the antibiotic tetracycline and many other compounds during fermentation. The compounds have yet to be known for their antibacterial potential. This work aims to determine new antibiotics or other possible antibacterial compounds produced by marine S.aureofaceiens A3 through an in silico molecular docking method. The ethyl acetate (EA) extracts from fermented marine S. aureofaciens A3 in ISP4 medium enriched with seawater components showed strong antibacterial activity.  The antibacterial activity of EA extracts during 6-12 days of fermentation was carried out by the Kirby-Bauer method and the compounds of EA extracts were analyzed by GC/MS. Compounds identified by GC/MS were ligands for an in silico molecular docking study against four target proteins (DNA gyrase, topoisomerase IV, PBP 1a, and DHFR) of pathogenic bacteria. The drug-likeness of selected chemicals as antibacterial agents was assessed using Lipinski's Rule of Five. The results showed the prospective compounds as a narrow-spectrum antibacterial, including 3,5-di-tert-Butyl-4-hydroxyphenylpropionic acid against PBP 1a and Benzenepropanoic acid, and 3,5-bis (1,1-dimethyl ethyl)-4-hydroxy-, methyl esters against DHFR. Substances with broad-spectrum antibacterial activity, such as 3-Acetylphenanthrene and 3-(p-Ethoxyphenyl)-5-(O-tolyloxymethyl)-2-oxazolidone, against multitarget DNA gyrase B and DHFR, 7,9-Di-tert-butyl-1-oxaspiro (4,5) Deca-6,9-diene-2,8-dione against PBP1a and DHFR, and isobenzofuro [5,6-b] benzofuran-8-carboxylic acid, 1,3-dihydro-7,10-dimethoxy-9-methyl-1-oxo-, methyl ester against DNA gyrase B, PBP 1a, and DHFR. On the 12th day of fermentation, two compounds were identified: isobenzofuro[5,6-b] benzofuran-8-carboxylic acid, 1,3-dihydro-7,10-dimethoxy-9-methyl-1-oxo-, methyl ester, and 3-(p-Ethoxyphenyl)-5-(O-tolyl oxy methyl)-2-oxazolidone.  This is the first report that these two compounds, known as potential drugs like antibiotics through in silico molecular docking, were first produced by Streptomyces species.
Comparisons of benthic associated fauna assemblages in seagrass meadows across conservation and non-conservation areas in Bali and Lombok, Indonesia Atmaja, Putu Satya Pratama; Laharjana, I Ketut Aditya Krisna; Suardana, A. A. Md. Ananda Putra; Van Keulen, Mike
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 29, No 1 (2024): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14710/ik.ijms.29.1.71-84

Abstract

Benthic ecosystem has been widely considered as an important feature of seagrass associated fauna, and its function as a grazer and linkage between primary producers and higher trophic level is well known. Though the importance of benthic fauna in seagrass ecosystems has been indicated in many studies, its biodiversity in spatial scale has often been poorly studied. This study aimed at examining the assemblages and diversity of benthic associated fauna in conservation areas (CA) and non-conservation areas (NCA) across the seagrass meadows in Bali and Lombok. This study found that the assemblages and diversity of benthic fauna greatly varied between the meadows. A total of 430 individuals associated to benthic fauna from 24 species were identified in Bali and Lombok. Of these, Gastropods were the highest class of taxa recorded in this study, followed by Bivalvia, Echinodermata, Decapoda, and Amphipoda. Permutation multivariate analysis of variance (PERMANOVA) revealed a significantly different benthic fauna diversity between sites. Non-metric Multidimensional Scaling (nMDS) and Bray–Curtis analysis showed a clear distinction of benthic fauna assemblages between CA and NCA, both in Bali and Lombok. These results indicated that from spatial perspective, different characteristics of seagrass meadows may represent different biodiversity of associated fauna. These differences might be driven by different anthropogenic pressure and variation of substrates among the meadows which may affect the composition of the benthic fauna ecosystems. The implication of this study was to providing baseline data on guiding the appropriate approach and strategies for management and conservations of seagrass ecosystems.
First Record Sparus aurata Larvae in Teluk Penyu Beach Cilacap, Indonesia, revealed by DNA Barcoding Nuryanto, Agus; Bhagawati, Dian; Winarni, Elly Tuti; Mahmoud, Hanan Hassan Alsheikh
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 28, No 4 (2023): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14710/ik.ijms.28.4.301-312

Abstract

Morphological identification often fails to reveal the taxonomic status of fish larvae. DNA barcoding using particular DNA segment is frequently successful in solving the faulty and might reveal overlooked species, including species outside their recognized geographic ranges, such as Eastern Atlantic seabream Sparus aurata. This study aims to assess fish larvae diversity in Teluk Penyu Beach, Cilacap Central Java, Indonesia, through the cytochrome c oxidase 1 barcoding. Fish larvae were collected using a larva net with a diameter of 60 cm and height of 150 cm and horizontal towing during the field trips in March and April 2021. Larvae morphotypes were determined based on their general morphological performance observed under a magnification lens according the available references. Eighteen larvae morphotypes were successfully barcoded, and 5% genetic distance was used as a species border. Fourteen fish larvae species were revealed, with intraspecific genetic distances between 0.00% and 4.12%, while intrageneric genetic distances ranged from 5.50% to 19.29%. An interesting finding was that one larva morphotype was barcoded as S. aurata with high genetic identity (99.19% to 99.68%) and low genetic distance (0.32% to 0.81%). The discovery provides the first new data on S. aurata in Teluk Penyu Beach Cilacap, Central Java, outside its recognized geographic range. Overall, this study provides information about fish larvae in Teluk Penyu Beach, essential for estimating the number and species of fish recruited in the southern Cilacap, which is vital for fisheries management. Nevertheless, new research requires further clarification of S. aurata in Teluk Penyu Beach.
Morphological Characteristics and Genetic Relationship of Red Snappers (Lutjanus timoriensis, Lutjanus malabaricus, Lutjanus erythropterus) in Papuan Waters Pranata, Bayu; Sala, Ridwan; Kusuma, Aradea Bujana; Purbani, Debora Christin; Mokodongan, Daniel Frikli; Sipriyadi, Sipriyadi; Azhar, Muhamad Ilham
ILMU KELAUTAN: Indonesian Journal of Marine Sciences Vol 29, No 2 (2024): Ilmu Kelautan
Publisher : Marine Science Department Diponegoro University

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14710/ik.ijms.29.2.191-200

Abstract

Environmental and genetic variables can exert an influence on alterations in morphological traits. Within fish species inhabiting diverse aquatic settings, there can be observed variations in morphological traits. Genetically, variations in fish morphological characteristics can occur through mating and gene flow. To date, there has been a lack of research conducted on the variability in morphological traits and genetic relationships between Lutjanus timoriensis, L. malabaricus, and L. erythropterus. Thus, the current research aimed to identify variations in the morphological characteristics as well as in the intra- and inter-specific relationships between three red snapper species from the genus Lutjanus.  Cytochrome oxidase I (COI) gene was used to study the molecular relationship among species of red snapper. The results showed that L. timoriensis had high intraspecific morphological variation in young individuals. Morphologically, L. timoriensis, L. malabaricus, and L. erythropterus are very similar. Unlike L. malabaricus and L. erythropterus, young and adult L. timoriensis have black patches in the pectoral fin axils. The adult L. erythropterus has a comparatively small mouth, no hump on its head, and no black saddle at the base of its tail. Meanwhile, L. malabaricus has a comparatively large mouth, a head with a hump, and a black saddle at the base of its tail. In terms of body size, L. erythropterus is larger than L. timoriensis and L. malabaricus. Based on NCBI and Bold System data, molecular analyses determined that the observed fish were L. timoriensis, L. malabaricus, L. erythropterus with a similarity of between 99.85 and 100%. The phylogenetic tree construction demonstrated that L. malabaricus, L. timoriensis and L. erythropterus were closely related.

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