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All Journal Jurnal Agronomi Indonesia (Indonesian Journal of Agronomy) Buletin Agrohorti Jurnal Ilmu Pertanian Indonesia Jurnal Fitopatologi Indonesia AGRIVITA, Journal of Agricultural Science Indonesian Journal of Biotechnology Jurnal Perlindungan Tanaman Indonesia JURNAL HAMA DAN PENYAKIT TUMBUHAN TROPIKA Jurnal Bioteknologi & Biosains Indonesia (JBBI)
. Giyanto
Department Of Plant Protection, Faculty Of Agriculture, IPB University Jln. Kamper, Kampus IPB Dramaga, Bogor, West Java 16680
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Economics, Econometrics & Finance Immunology & microbiology Materials Science & Nanotechnology Medicine & Pharmacology

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Uji In Vitro Asap Cair terhadap Ralstonia syzygii subsp. celebesensis Penyebab Penyakit Darah pada Pisang Aisyah Imas; Giyanto Giyanto; Meity Suradji Sinaga; Abdjad Asih Nawangsih; Gustan Pari
Jurnal Fitopatologi Indonesia Vol 14 No 4 (2018)
Publisher : The Indonesian Phytopathological Society (Perhimpunan Fitopatologi Indonesia)

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (600.062 KB) | DOI: 10.14692/jfi.14.4.145

Abstract

In Vitro Test of Liquid Smoke against Ralstonia syzygii subsp. Celebesensis, the Cause of Blood Disease in Bananas Blood disease, caused by Ralstonia syzygii subsp. celebesensis, is an important disease of banana plants in Indonesia. Several control methods have been done, but the result were not effective.  Liquid smoke from wood waste is reported to be antimicrobial, but its use for controlling R. syzygii subsp. celebesensis has never been reported. Research was conducted to examine the ability of liquid smoke produced from coconut shell (CS-LS), pinecone (P-LS), and oil palm branch (OPB-LS) in inhibiting the growth of R. syzygii subsp. celebensensis in vitro and its effect on bacterial cell morphology. Efficacy test of liquid smoke was carried out by agar diffusion method and measurement of bacterial density by spectrophotometry with ʎ 600 nm. Observation of bacterial cell morphology was carried out by electron microscopy. The CS-LS, P-LS, and OPB-LS starting from 0.5% concentration showed inhibitory activity against R. syzygii subsp. celebesensis both on triphenyl tetrazolium chloride medium and luria bertani broth. Liquid smoke also caused damage to cell walls and cell membranes. Therefore, liquid smoke has the potential to be used as component in control method for R. syzygii subsp. celebesensis.
The Potential Biological Agent Bacteria Against for Controling Important Pathogens on Rice Ratna Sari Dewi; Giyanto Giyanto; Meity Suradji Sinaga; Dadang Dadang; Bambang Nuryanto
Jurnal Fitopatologi Indonesia Vol 16 No 1 (2020)
Publisher : The Indonesian Phytopathological Society (Perhimpunan Fitopatologi Indonesia)

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (608.052 KB) | DOI: 10.14692/jfi.16.1.37-48

Abstract

Saat ini teknologi pengendalian hayati penyakit utama padi terus berkembang. Dalam pengembangan teknologi pengendalian hayati, mekanisme penghambatan patogen dalam perkembangan penyakit pada suatu populasi tumbuhan dalam area tertentu menjadi hal yang penting. Penelitian bertujuan mendapatkan bakteri agens hayati potensial dalam pengendalian penyakit penting padi di antaranya yang disebabkan Pyricularia oryzae, Xanthomnas oryzae pv. oryzae, Rhizoctonia solani, Burkholderia glumae, dan Drechlera oryzae, berdasarkan mekanisme antagonisme, kemampuan menginduksi ketahanan dan mendukung kebugaran tanaman, serta kompatibilitas antaragens hayati. Ralstonia pickettii TT47, Pseudomonas fluorescens P12, Chromobacterium sp. T51118, Bacillus subtilis 451 dan 154, serta Streptomyces sp. T51105 dibuktikan memiliki mekanisme antibiosis dengan menghasilkan metabolit sekunder dan senyawa volatil. Berdasarkan uji produksi enzim kitinolitik Chromobacterium sp. dan Streptomyces sp. memiliki mekanisme lisis. Aktivitas antibiotik R. pickettii dan P. fluorescens tergolong kuat terhadap P. oryzae dengan penekanan secara berurutan sebesar 79.68% dan 77.59% pada uji biakan ganda. Penekanan pertumbuhan miselium P. oryzae dan R. solani pada uji volatil mencapai 100% oleh Chromobacterium sp. Semua agens hayati umumnya mampu menginduksi ketahanan dan mendukung kebugaran tanaman. Uji kompatibilitas menunjukan R. pickettii, P. fluorescens, dan Chromobacterium sp. bersifat kompatibel. Dari hasil penelitian diperoleh tiga bakteri agens hayati dengan kategori unggul, yaitu P. fluorescens P12, R. pickettii TT47, dan Chromobacterium sp. T51118. Ketiganya mampu menekan pertumbuhan patogen, menginduksi ketahanan dan mendukung kebugaran tanaman, memiliki patogen sasaran yang lebih beragam, serta bersifat kompatibel.
Pengendalian Burkholderia glumae pada Benih Padi dengan Perlakuan Panas Kering dan Minyak Cengkeh Kresnamurti Kurniasih; Giyanto Giyanto; Meity Suradji Sinaga; Kikin Hamzah Mutaqin; Eny Widajati
Jurnal Fitopatologi Indonesia Vol. 16 No. 3 (2020)
Publisher : The Indonesian Phytopathological Society (Perhimpunan Fitopatologi Indonesia)

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14692/jfi.16.3.123-134

Abstract

Control of Burkholderia glumae in Rice Seed by Dry Heat and Clove Oil Treatments Burkholderia glumae is a seed-borne pathogen that causes bacterial grain rot (BGR) ​disease in rice. This study aims to obtain ​disease in rice. This study aims to obtain B. glumae control techniques in rice seeds using a combination of dry heat and clove oil treatment without reducing the quality of rice seeds. This research consisted of several stages, namely: 1) preparation of healthy and infected seeds of B. glumae, 2) determination of the temperature and duration range of treatment that effectively reduced of the B. glumae population without reducing the viability of healthy seeds, 3) the effect of dry heat treatment on population B. glumae and seed viability of infected seed, 4) determination concentration of clove oil that decreases B. glumae population without decreasing seed viability of healthy seed, 5) the effect of clove oil treatment on B. glumae population and seed viability of infected seed and 6) combination of dry heat and clove oil treatment to control B. glumae in infected seed. The study showed that B. glumae population in rice seeds reduced as much as 97.68%, 98.00% dan 99.38% by dry heat treatment at 55 °C for 3, 4, and 5 hours without decreasing seed germination (seeds germination respectively 92%, 94% dan 93%). Application of clove oil 0.5% and 0.75% were able to reduce the bacterial population of 86.61% and 98.26% with the seed germination of 90.25% and 90.00%. The combination of 0.75% clove oil treatment followed by dry heat treatment at 55 °C for 5 hours eliminated all B. glumae in rice seeds without reducing the seed germination
The Keefektifan Bakteri Asal Lahan Gambut sebagai Agens Pengendalian Penyakit Kresek dan Pupuk Hayati pada Tanaman Padi Giyanto Giyanto; Ali Nurmansyah
Jurnal Fitopatologi Indonesia Vol 17 No 2 (2021)
Publisher : The Indonesian Phytopathological Society (Perhimpunan Fitopatologi Indonesia)

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14692/jfi.17.2.67-75

Abstract

Penggunaan mikrob untuk pengendalian penyakit dan pupuk hayati telah dikembangkan sebagai alternatif bagi pengembangan pertanian ramah lingkungan. Upaya mendapatkan mikrob tersebut terus dilakukan dengan eksplorasi mikrob dari berbagai tipe habitat ekologi untuk mendapatkan yang diinginkan. Lahan gambut diduga mengandung banyak jenis mikrob khususnya bakteri yang berpotensi sebagai agens antagonis sekaligus pupuk hayati yang bermanfaat bagi tanaman. Penelitian ini bertujuan mendapatkan galur bakteri yang berpotensi mengendalikan penyakit kresek atau hawar daun bakteri yang disebabkan oleh Xanthomonas oryzae pv. oryzae sekaligus sebagai pupuk hayati. Tahapan penelitian mencakup pengambilan sampel, isolasi bakteri asal lahan gambut serta uji potensinya sebagai agens hayati terhadap X. oryzae pv. oryzae, uji keamanan hayati, karakterisasi galur potensial, uji keefektifan bakteri sebagai agens antagonis sekaligus pupuk hayati in planta. Bakteri yang diisolasi dari tanah hutan gambut dan sawah bekas lahan gambut ialah sebanyak 134 isolat bakteri dan 40 di antaranya memiliki karakteristik morfologi yang berbeda. Sebanyak 14 galur bakteri asal tanah gambut mampu menekan perkembangan X. oryzae pv. oryzae. Karakterisasi 14 galur bakteri terhadap uji hypersensitive response, hemolisis agar-agar darah, kemampuan menambat nitrogen, siderofor yang dihasilkan, pelarut fosfat serta degradasi selulosa menghasilkan empat galur bakteri potensial. Keempat galur ini tidak berpotensi sebagai patogen terhadap tanaman maupun mamalia serta memiliki karakter sebagai pupuk hayati. Uji in planta empat galur bakteri ini menunjukkan bahwa bakteri tersebut mampu menekan keparahan penyakit hawar daun pada padi serta meningkatkan pertumbuhan padi pada fase vegetatif.
Asap Cair Sebagai Pemacu Pertumbuhan dan Ketahanan Tanaman Pisang terhadap Ralstonia syzygii subsp. celebesensis Muhammad Evan Nurrahmawan; Giyanto; Abdjad Asih Nawangsih; Erina Sulistiani
Jurnal Fitopatologi Indonesia Vol 17 No 5 (2021)
Publisher : The Indonesian Phytopathological Society (Perhimpunan Fitopatologi Indonesia)

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14692/jfi.17.5.183-194

Abstract

Bibit pisang hasil kultur jaringan diketahui rentan terhadap cekaman pada awal pertumbuhan di lapangan. Pra-pengondisian bibit menggunakan agens priming dilaporkan meningkatkan pertumbuhan dan ketahanan tanaman. Asap cair tempurung kelapa dilaporkan mampu memacu pertumbuhan dan menginduksi ketahanan tanaman. Penelitian ini bertujuan mendapatkan informasi pengaruh asap cair asal tempurung kelapa terhadap pertumbuhan dan aktivitas enzim ketahanan pada plantlet pisang Cavendish pada fase induksi perakaran serta penekanan R. syzygii subsp. celebesensis secara in vitro. Tahapan penelitian mencakup uji fitotoksisitas asap cair, analisis pertumbuhan plantlet, analisis aktivitas enzim peroksidase dan polifenol oksidase, isolasi R. syzygii subsp. celebesensis, dan uji toksisitas asap cair terhadap R. syzygii subsp. celebesensis secara in vitro. Hasil penelitian menunjukkan perlakuan asap cair pada konsentrasi ≥ 1.5% bersifat fitotoksik dengan gejala meliputi klorosis, nekrosis, terbentuk lendir dan kematian plantlet. Perlakuan asap cair pada konsentrasi ≤ 1% tidak bersifat fitotoksik, bahkan peningkatan pertumbuhan plantlet optimum ditunjukkan pada perlakuan asap cair 0.1%. Perlakuan asap cair menyebabkan peningkatan aktivitas enzim ketahanan pada 2, 4 dan 6 hari setelah tanam (HST), tetapi menurun pada 30 HST. Selain itu, asap cair bersifat antibakteri melalui terbentuknya zona hambat dan menyebabkan penurunan nilai kerapatan sel R. syzygii subsp. celebesensis. Penelitian ini menunjukkan potensi teknik priming untuk pengendalian penyakit darah pisang terutama pada bibit pisang hasil kultur jaringan.
Potential of Bacterial Isolates from Peat Land as Controlling Agent for the Root Knot Nematodes Meloidogyne incognita Elvina Efendi; Supramana; Giyanto
Jurnal Fitopatologi Indonesia Vol 17 No 6 (2021)
Publisher : The Indonesian Phytopathological Society (Perhimpunan Fitopatologi Indonesia)

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14692/jfi.17.6.243-250

Abstract

Potential of Bacterial Isolates from Peat Land as Controlling Agent for the Root Knot Nematodes Meloidogyne incognita The root-knot nematodes (Meloidogyne spp.) is an important parasite of cultivated plants and have a wide host range. One of the potential alternative to controlling this pathogen is by utilizing non-pathogenic bacteria. This study aims to evaluate the potential of bacteria from peat as a biological control agent for the root-knot nematodes (M. incognita). In vitro testing was conducted by using filtrate of 15 bacterial isolates against M. incognita juvenile 2 (J2) in a 5 cm petri dish. Fivety juveniles (J2) of M. incognita were added to 4.5 mL of bacterial filtrate and incubated at 27 ℃. Nematode mortality was observed at 6, 12, and 24 hours after treatment. The experiment was arranged in a completely randomized design with three replications. The variables observed include the percentage of nematode mortality and the length of lethal exposure to nematodes. Physiological characterization test was carried out to the bacterial isolates including the production of HCN and chitinase enzymes. The results showed that nine bacterial isolates, that are GA2 GAA1, GT1 GTA7, GT1 GTB3, GT1 GTB4, GT1 GTB6, GT1 GTB7, GT1 GTC2, GT1 GTC4, and STDHC4 perform nematicidal activities with mortality level 83% to 94%. Three bacterial isolates, that are GT1 GTB4, GT1 GTB7, and GT1 GTC2 produce chitinase enzymes with lysis index above 1, but none of those isolates produce HCN. Bacterial isolates GT1 GTB4 and GT1 GTB7 had 99% homology with Serratia marcescens from China, and GT1 GTC2 had 99% homology with Streptomyces sp. AT67 from South Korea.
Isolation, identification, and detection of ACC deaminase gene-encoding rhizobacteria from rhizosphere of stressed pineapple Dori Kusuma Jaya; Giyanto Giyanto; Novik Nurhidayat; Sarjiya Antonius
Indonesian Journal of Biotechnology Vol 24, No 1 (2019)
Publisher : Universitas Gadjah Mada

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (1615.339 KB) | DOI: 10.22146/ijbiotech.39018

Abstract

ACC deaminase is a microbial cytoplasmic enzyme that cleaves ACC, a precursor of ethylene, in the stressed plant. The aims of this study were to isolate, identify, and detect the presence of ACC deaminase gene-encoding rhizobacteria from the rhizospheric soil of pineapple plants that have been exposed to abiotic and biotic stress, specifically herbicide, flooding, and Phytophthora spp. stress. A total of 49 rhizobacterial isolates were obtained, seven of which were observed for their growth on DF medium containing 3 mM L-1 ACC. The four best-growing isolates were selected for genomic DNA extraction. They were molecularly identified as Stenotrophomonas maltophilia (3), Burkholderia territorii (2A), Pseudomonas oryzihabitans (5B), and Bacillus tropicus (1E). A set of primers, 105F-acdS 5’-TGCCAAGCGTGAAGACTGC-3’ and 244R-acdS 5’-GGGTCTGGTTCGACTGGAT-3’, were constructed to amplify the ACC deaminase gene (acdS). Based on melt peak curve analysis, four products appeared to show a specific single peak at 86, 89, 87, and 89.5°C, indicating a single product was produced. In addition, a Blast search showed that these four products met the ACC deaminase feature and their acdS sequences were clustered into an ancestral group compared with the bacterial strains deposited in GenBank. These results suggest that ACC deaminase gene-encoding rhizobacteria from a pineapple plantation of tropical origin may affect the acdS sequences and may contribute to the host plant’s stress tolerance.
Morphological and Molecular Characteristics of Pratylenchus coffeae from the Origin of Robusta Coffee Plantation in Malang, East Java Aris Budiman; Supramana Supramana; Giyanto Giyanto
Jurnal Perlindungan Tanaman Indonesia Vol 23, No 2 (2019)
Publisher : Universitas Gadjah Mada

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22146/jpti.42481

Abstract

Pratylenchus coffeae is the most important plant-parasitic nematode in Robusta coffee plantations. Information regarding morphology, morphometric and molecular characters of P. coffeae has not been reported in Indonesia. This study is aimed to describe those characters of P. coffeae that attack Robusta coffee. Root samples were taken from Robusta coffee plantation in Malang, East Java. Nematode extractions was conducted using a mist chamber method. Morphology and morphometric characters were observed from the permanent nematode slides. Single nematode DNA extract was amplified at the D2D3 segment of 28S rRNA and ITS1-5.8S-ITS2 rRNA with universal primers. Amplicon was sequenced and analysed for phylogenetic tree relationships. Female morphological key character of P. coffeae observed are: lip with two annulations, four lateral lines, esophageal overlap with intestine ventrally, monodelphic, and truncated tail shape. Male spicules curved ventrally. Female morphometrics are: n=26, L = 556.4 μm, DGO = 2.4 μm, anterior gonad = 174.8 μm, a = 28.5, b = 6.1, b’ = 4.1, c = 20.1, c’ = 2.3, V = 81.7. A Male is smaller than a female with n=24, L = 505.9 μm,  a = 32.3, b = 5.5, b '= 3.9, c = 15.3, c' = 2.8 and T = 40.6. The molecular characters of P. coffeae were investigated for two isolates, namely SA1 and SA2.  Based on the D2D3 and ITS1-5.8S-ITS2 regions, isolate SA1 has similarity level of 99% and 97% to the P. coffeae  from NCBI. Similar result was shown by Isolate SA2 with similarity of 100% and 100% respectively. Phylogenetic tree analysis using Maximum Likelihood at the D2D3 segment of 28S rRNA and ITS1-5.8S-ITS2 regions showed that P. coffeae in this study was included in one clade with P. coffeae from several countries.
Phytonematodes Community and Polyphasic Character of Aphelenchoides varicaudatus on Garlic Plants in Tegal Regency, Central Java Mokhammad Danang Kusuma; Supramana Supramana; Giyanto Giyanto
Jurnal Perlindungan Tanaman Indonesia Vol 24, No 2 (2020)
Publisher : Universitas Gadjah Mada

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22146/jpti.49779

Abstract

The interception of Ditylenchus dipsaci, D. destructor, and Aphelenchoides fragariae, which are classified as quarantine pests, has been reported to occur on imported garlic bulbs used for consumption at several traditional markets in Bogor. This finding should increase awareness of the chance of garlic contamination in Indonesia’s garlic fields. This study aimed to evaluate the nematode community and determine polyphasic characters of Aphelenchoides species from garlic plantations. The study was conducted by sampling soil and plants from garlic plantations in Tuwel and Rembul Villages, Bojong District, Tegal Regency, Central Java in December 2018. Nematode extraction was done using a mist chamber for plant materials and sugar flotation – centrifugation methods for soil samples. Parameters measured included nematode species identity, absolute population and prominence indexes. Nematode identification was conducted based on their morphological characters. Further identification based on morphometric and molecular characters (polyphasic) conducted for nematodes species suspected as quarantine pests. Six generas of nematodes identified were Helicotylenchus, Aphelenchoides, Rotylenchulus, Aphelenchus, Criconemoides, and Tylenchus. Aphelenchoides sp. had the highest prominence value from plant tissue with a value of 6.32 and is categorized as a quarantine pest genus (A. fragariae) in garlic and was further identified to the species level. Further identification based on polyphasic characters showed the Aphelenchoides sp. found was A. varicaudatus.
Utilization of Liquid Smoke to Suppress Blood Diseases on Bananas and Its Effects on the Plant Growth Imas Aisyah; Meity Suradji Sinaga; Abdjad Asih Nawangsih; Giyanto Giyanto; Gustan Pari
AGRIVITA, Journal of Agricultural Science Vol 40, No 3 (2018): OCTOBER
Publisher : Faculty of Agriculture University of Brawijaya in collaboration with PERAGI

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.17503/agrivita.v40i3.1390

Abstract

Liquid smoke is reported to be effective to inhibit some bacteria. The study aimed to evaluate the effects of liquid smoke (LS) from coconut shell (CS-LS), pinecone (P-LS), and oil palm branch (OPB-LS) on the incidences of blood disease, induced resistance to Ralstonia syzygii subsp. celebesensis, and plant growth. Two days after banana seedlings were treated with LS, ethylene, auxin, lignin, activities of the enzymes of peroxidase (POD) and phenylalanine ammonia lyase (PAL) on the root of the banana seedlings were measured. Then, the seedlings were inoculated by R. syzygii subsp. celebesensis. The plant growth and incidence of blood diseases were observed daily and the 31st day after the application of LS and this bacteria inoculation. The results showed that the CS-LS, P-LS, and OPB-LS at all tested concentration could suppress the incidence of blood diseases up to 100 %, induce resistance of banana seedlings to the R. syzygii subsp. celebesensis with increased levels of ethylene, auxin, lignin, activities of POD and PAL, and plant growth, significantly. Based on the effectiveness of this bacterial control and the ability to promote the growth of banana seedlings test, it is recommended that the most effective treatment is P-LS 0.5 %.
Co-Authors Abdjad Asih Nawangsih Agus Eko Prasetyo Aisyah Imas ALI NURMANSYAH Andi Takdir Anwar, Aswaldi Aprizal Zainal Aris Budiman Awaludin Hipi Bambang Nuryanto Dadang Dadang DAMAYANTI BUCHORI Dori Kusuma Jaya DWI ANDREAS SANTOSA Efi Toding Tondok Elvina Efendi Eny Widajati Erina Sulistiani Gustan Pari Gustan Pari Haliatur Rahma, Haliatur Herliyana Indahwardani Idham Sakti Harahap Imas Aisyah Indahwardani, Herliyana Kikin H Mutaqin Kikin H. Mutaqien Kresnamurti Kurniasih Leiwakabessy, Christoffol Mahardika Gama Pradana Meity S Sinaga, Meity S Meity Suradji Sinaga Meity Suradji Sinaga Meity Suradji Sinaga Meity Suradji Sinaga Meity Suradji Sinaga Memen Suharman, Memen Memen Surahman Mokhammad Danang Kusuma Mubin, Nadzirum Muhammad Evan Nurrahmawan Muhammad Yasin Sonhaji Novik Nurhidayat RAHAYU WIDYASTUTI Ratna Sari Dewi Sanjaya, Wilhelmus Terang Arga Sarah Desmia Muchtar Sarah Desmia Muchtar Sarijan, Abdullah - Sarjiya Antonius Satoshi Nakamura SATRIYAS ILYAS Seiichi Furukawa Setiawan, Asep S Sudarsono Supramana Syaiful Khoiri TRI ASMIRA DAMAYANTI Trikoesoemaningtyas Tuminem ., Tuminem