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Umi Trisnaningsih
Universitas Swadaya Gunung Jati
Agriculture, Biological Sciences & Forestry Arts Humanities Biochemistry, Genetics & Molecular Biology Civil Engineering, Building, Construction & Architecture Computer Science & IT Economics, Econometrics & Finance Education Engineering Environmental Science Health Professions Languange, Linguistic, Communication & Media Nursing Public Health Social Sciences Veterinary Other

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Journal : Agricultural Science

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Characterization of Mangoes In Cirebon Using The Single Nucleotide Polymorphism Method (Snp) Chika Septianingsih; Umi Trisnaningsih; Dony Nauphar
Agricultural Science Vol. 9 No. 2 (2026): March In Progress
Publisher : Faculty of Agriculture, Merdeka University Surabaya, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.55173/agriscience.v9i2.199

Abstract

Mango (Mangifera indica L.) is a leading horticultural commodity in Cirebon Regency, boasting a diverse array of local varieties with distinct fruit characteristics. Varietal identification has traditionally been based on morphological characteristics, but this method is often inaccurate due to environmental factors. Therefore, a more stable and objective molecular-based approach is needed, one of which is Single Nucleotide Polymorphism (SNP) analysis. This study aims to characterize the genetic diversity of mangoes in Cirebon using SNP markers as a basis for kinship information and potential variety development. The research methods included leaf sampling from several local Cirebon mango varieties, genomic DNA isolation, DNA amplification using the Polymerase Chain Reaction (PCR) method, and sequencing analysis to identify SNP variations. The SNP data obtained were analyzed to assess genetic diversity and kinship among mango varieties. The results showed genetic differences between local mango varieties that could be clearly distinguished using SNP markers. In conclusion, SNP-based characterization of Cirebon mango is effective for revealing genetic diversity and can serve as a basis for variety identification, preservation of local germplasm, and support for mango breeding and development programs in the Cirebon region.
Co-Authors - Wijaya A Harijanto S Abdurrazaq, Difaa Ali Subhan Achmad Faqih Agus Sonjaya Agustiar, Riza Dwi Amran Jaenudin Asep Mulyana Auliya, Sukma Nur Bambang Bambang Budirokhman, Dodi Chika Septianingsih Deden Deden Dhani, Dhani Dina Dwirayani Dwirayani Djodjo Sumardjo Dodi Budirokhman Dodi Budirokhman Dony Nauphar Dukat Dukat Dwimulyani, Sopiah Dwirayani, Dina Eman Suherman Eman Suherman Endang Tadjudin Esaroh Nur Handayani Faqih, Achmad Fatahillah, Tidar Aru Fatiharizqi, Muhammad Firdausi, Annatasya Risqi Ghani Dwi Risa Nugraha Hary Robiansah Ida Satya Wahyu Atmaja Ismail Saleh ISMAIL SALEH Jodi Wicaksono Jojo Subagja Lupi Anggraeni Maulana, Wahyudi Meilina Prasetyo Meiza Maajid Panuntas Nova Abda Nugraha Nur Auliya, Sukma Nur Cahaya Nurraffa, Muhammad Fatiharizqi Prasetyo, Meilina Pujiana Pujiana Putra, Lucky Firdaus Ray March Syahadat Riza Dwi Agustiar Rosmala, Elis Sidik, Johan Siti Wahyuasih Siti Wahyuni Siti Wahyuni Siti Wahyuni Siti Wahyuni Siti Wahyuni Slamet . Sopiah Dwimulyani Subandi Nur Subandi Subandi Subhan Abdurrazaq, Difaa Ali Subhan Abdurrazaq, Diffa Ali Suciaty, Tety Suhada, Hadisfied Rama Suminar, Yuyum Tadjudin Surawinata Wachdijono Wachdijono Wachdijono, Wachdijono Wachijono Wachijono Widya Astuti WIJAYA WIJAYA, WIJAYA Yayat Rahmat Hidayat Yayat Rahmat Hidayat, Yayat Rahmat Yoyoh Rohayati Yuantara, Iyan Yuherdin, Widyo