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All Journal HAYATI Journal of Biosciences Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences Berkala Ilmiah Pendidikan Biologi (BioEdu) BIOTROPIA - The Southeast Asian Journal of Tropical Biology Alchemy : Journal of Chemistry Jurnal Harpodon Borneo Biotropika ZOO INDONESIA Jurnal Biodjati Bioedukasi: Jurnal Pendidikan Biologi Jurnal Abdi: Media Pengabdian Kepada Masyarakat Sains dan Matematika Zoo Indonesia Borneo Journal of Biology Education (BJBE) Rumphius Pattimura Biological Journal Biosaintifika: Journal of Biology & Biology Education BIO-SAINS | Jurnal Ilmiah Biologi Edubiotik : Jurnal Pendidikan, Biologi dan Terapan
Dwi Anggorowati Rahayu
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Agriculture, Biological Sciences & Forestry Humanities Astronomy Biochemistry, Genetics & Molecular Biology Chemical Engineering, Chemistry & Bioengineering Chemistry Computer Science & IT Decision Sciences, Operations Research & Management Earth & Planetary Sciences Economics, Econometrics & Finance Education Energy Environmental Science Immunology & microbiology Languange, Linguistic, Communication & Media Materials Science & Nanotechnology Mathematics Physics Social Sciences Veterinary Other

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KEANEKARAGAMAN JENIS IKAN DI SUNGAI KAWASAN GRESIK SELATAN FISH SPECIES DIVERSITY IN RIVERS OF SOUTH GRESIK AREA Tresna Sulung, Cahya Ajeng Valenta; Afnani, Moh. Royhan; Hamidah, Safira Aini Ilmi; Rahayu, Dwi Anggorowati
BIO-SAINS : Jurnal Ilmiah Biologi Vol 5 No 1 (2025): Bio-Sains - Jurnal Ilmiah Biologi | Maret 2025
Publisher : Fakultas Sains dan Teknologi, Universitas Islam As-Syafi'iyah

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.34005/bio-sains.v5i1.4827

Abstract

Keanekaragaman jenis ikan air tawar tergantung pada kualitas air sungai. Penurunan kualitas air sungai akibat limbah industri akan berdampak pada kehidupan. Penelitian ini bertujuan untuk mengidentifikasi dan menganalisis keanekaragaman jenis ikan di dua lokasi sungai kawasan Gresik Selatan, yakni Sungai Driyorejo dan Sungai di Perumahan Sumput Asri. Metode yang digunakan dalam penelitian ini adalah metode survei dan eksploratif melalui pengambilan sampel secara langsung pada lokasi penelitian dengan metode tangkap menggunakan jaring, seser, dan pancing. Identifikasi ikan dilakukan melalui karakter morfometri, meristik, dan morfologi secara langsung di laboratorium. Hasil penelitian menunjukkan terdapat enam spesies ikan dari enam famili, yaitu Oreochromis mossambicus, Anabas testudineus, Aplocheilus panchax, Hypocarpus perdalis, Clarias gariepinus, dan Monopterus albus, dengan jumlah total 14 individu. Indeks keanekaragaman Shannon-Wiener (H') sebesar 1,574 mengindikasikan tingkat keanekaragaman yang sedang. Jenis ikan yang paling dominan adalah Aplocheilus panchax (Gatul), yang diduga memiliki toleransi tinggi terhadap kualitas air yang rendah akibat aktivitas industri di sekitar sungai. Penelitian ini menunjukkan bahwa kondisi ekologis sungai di kawasan Gresik Selatan berada pada tingkat tekanan sedang, dan diperlukan upaya pemantauan serta pengelolaan lingkungan untuk menjaga kelestarian spesies ikan lokal.
Gastropod Diversity in Pacar Pucang Laban Beach Tulungagung Regency Rohmah, Tri Lestari Saidha; Afnani, Moh. Royhan; Rahayu, Dwi Anggorowati
Sains dan Matematika Vol. 10 No. 1 (2025): April, Sains dan Matematika
Publisher : Universitas Negeri Surabaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.26740/sainsmat.v10n1.p29-36

Abstract

Tulungagung is a city that has a variety of beautiful beaches, one of which is Pacar beach. The condition of the beach which is still natural and clean makes this beach inhabited by a wide variety of marine biota, one of which is gastropods. The purpose of this study was to determine the diversity and relative abundance of Gastropods and the environmental conditions that affect Gastropods at Pacar Beach Pucang Laban, Tulungagung. Sampling used the transect method, by placing three transect lines. For each transect line was placed three square plots measuring 1x1 m2 each in each intertidal. Gastropods taken were gastropods that were found in each squared plot and in the substrate to a depth of 5 cm. The results of this study found 18 species belonging to 14 families. The results of the diversity obtained were based on the Shanon Wiener indeks are 2.461, which was dominated by the abundance of gastropods Clanculus atropurpureus and Conus (Lividoconus) lividus. The highest relative abundance came from the Trochidae family, Clanculus atropurpureus species of 20.97%, followed by the species Conus (Lividoconus) lividus from the Conidae family with a relative abundance of 17.74%.
Morphological plasticity of uceng fish (Nemacheilus spp.): A statistical exploration of water quality influences in East Java’s river Rahayu, Dwi Anggorowati; Nugroho, Endik Deni; Sulung, Cahya Ajeng Valenta Tresna; Rusdianto, Rusdianto; Mamat, Noorhidayah Binti
Edubiotik : Jurnal Pendidikan, Biologi dan Terapan Vol. 10 No. 01 (2025): Edubiotik : Jurnal Pendidikan, Biologi dan Terapan
Publisher : Biology Education Department, Universitas Insan Budi Utomo, Malang, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.33503/ebio.v10i01.1383

Abstract

Morphological plasticity in aquatic organisms is an adaptive phenomenon that enables species to respond to changing environmental conditions, particularly in native fish species such as the Uceng fish. This study aims to: (1) describe the morphological variation of the Uceng fish and water quality parameters in three river locations in East Java; (2) analyze the relationship between water quality parameters and the morphological characteristics of the Uceng fish; (3) identify the water quality parameters that most affect morphological variation of fish through PCA analysis; and (4) model the relationship between water quality parameters as independent variables and fish morphological characteristics as dependent variables. This research employed a correlational approach with a cross-sectional comparative design, comparing fish samples from three different geographic locations: Blitar, Pasuruan, and Lumajang. Data analysis was conducted using correlation analysis, PCA, and multiple regression modeling. Measurement of the Morphological Characteristics of the Uceng Fish, Morphometric Measurement (14 characters). The results showed a significant negative correlation (r = -0.155, p = 0.017) between environmental factors and fish morphology, with approximately 33% of the morphological variation explained by the combination of environmental factors (DO, temperature, COD, and TDS). PCA analysis identified DO as the parameter with the strongest positive influence, while temperature, COD, and TDS showed negative effects. These findings emphasize the species’ adaptive capacity and underline the importance of monitoring environmental quality to support biodiversity conservation in increasingly impacted river ecosystems of East Java.
Molecular characterization of genus Tor from Indonesia based on 16S rRNA Rahayu, Dwi Anggorowati; Nugroho, Endik Deni; Azrianingsih, Rodiyati; Kurniawan, Nia
Edubiotik : Jurnal Pendidikan, Biologi dan Terapan Vol. 7 No. 01 (2022): Edubiotik : Jurnal Pendidikan, Biologi dan Terapan
Publisher : Biology Education Department, Universitas Insan Budi Utomo, Malang, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.33503/ebio.v7i01.1880

Abstract

Genus Tor is Indonesia's endangered local fish however, the reports on this species from South East Asia is currently limited. This study conducted to characterize molecular genetics and phylogenetic relationship of Tor fish from East Java, West Kalimantan, Padang and North Sumatra from BPBAT Bogor collection using a partial sequence of mtDNA 16S rRNA. A total of ten samples of Genus Tor were collected, then identified based on morphological characters, and the identification was confirmed using molecular data. PCR amplicons at 542 bp in length. The construction of phylogenetic topology was made based on ML and NJ method using Kimura-2 parameter model. Based on the phylogenetic topology showed that Tor fish from Pasuruan are closely related to Tor duoronensis from Padang with a bootstrap value of 66%, while Tor duoronensis fish from North Sumatra and Tor tambra from West Kalimantan are in separated clusters. This finding also contributes to the differentiate Genus Tor from Indonesia based on polymorphic sites
Molecular Analysis and Morphological Characterization of Tor sp. using DNA Barcode COI from Telaga Rambut Monte, Blitar, East Java, Indonesia Damayanti, Ayu Elysia; Rabbani, Calista Naya; Sulung, Cahya Ajeng Valenta Tresna; Rusdianto, Rusdianto; Nugroho, Endik Deni; Mamat, Noorhidayah Binti; Rahayu, Dwi Anggorowati
Biotropika: Journal of Tropical Biology Vol. 13 No. 2 (2025)
Publisher : Universitas Brawijaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.21776/ub.biotropika.2025.013.02.011

Abstract

The genus Tor (Cyprinidae) comprises highly diverse freshwater fishes widely distributed in Southeast Asia, including Indonesia. However, information on Tor species in several regions remains limited. This study aimed to identify Tor species from Telaga Rambut Monte, Blitar, using morphological analysis and molecular approaches based on COI DNA barcoding. Fish were collected through purposive sampling at depths of 1–2 m, and fin tissues were preserved in ethanol for DNA extraction. PCR amplification employed LCO1490 and HCO2198 primers, with sequence analysis conducted using BLAST and the BOLD System. Phylogenetic reconstruction applied Neighbour-Joining and Maximum Likelihood methods under the Kimura 2-Parameter model, supported by p-distance analysis with MEGA, Clustal X, BioEdit, and ABGD. Morphological characterisation confirmed the specimens as Tor tambra. COI gene amplification produced a 477 bp sequence, which showed 92% genetic similarity to the reference T. tambra. The phylogenetic tree revealed a distinct clade with a high bootstrap value (96%), clearly separating T. tambra from other congeners. Integrating morphological and molecular data provides robust evidence confirming the presence of T. tambra in Telaga Rambut Monte. This research represents the first study combining genetic identification, morphological analysis, and phylogenetic reconstruction of T. tambra from this locality. The findings contribute to understanding freshwater fish biodiversity in Indonesia and provide important baseline information on the distribution of local fish resources.
Potensi Mimi Mintuna (Horseshoe Crab) Khas Madura Sebagai Daya Tarik Eko-wisata Berbasis Edukasi Masyarakat Jawa Timur Rofiah Mauludiyah, Nurhidayati; Novelia, Adelin; Kautsaranny, Safira; Rahayu, Dwi Anggorowati
Sains dan Matematika Vol. 7 No. 1 (2022): April, Sains & Matematika
Publisher : Universitas Negeri Surabaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.26740/sainsmat.v7n1.p33-38

Abstract

Mimi mintuna (horseshoe crab) termasuk hewan Arthropoda yang langka dan terancam punah, namun keberadaanya belum mendapatkan perhatian masyarakat sekitar. Penelitian ini bertujuan untuk mengidentifikasi jenis, menganalisis kekerabatan, nilai similaritas berdasarkan karakteristik morfologi spesies mimi mintuna khas yang ditemukan di Madura sebagai solusi pelestarian jenis serta perannya sebagai daya tarik eko-wisata berbasis edukasi bagi masyarakat Jawa Timur. Metode yang digunakan adalah teknik observasi dan hand sampling dari Pantai Batah Timur, Kwanyar, Bangkalan, Madura, serta spesies acuan dianut dari buku identifikasi Sekiguchi dan Shuster (2009). Hasil penelitian menunjukkan jenis mimi mintuna khas yang ditemukan Madura adalah Carcinoscorpius rotundicauda, Analisis kekerabatan menunjukkan 3 kelompok kekerabatan yang terdekat hingga terjauh, dan 2 kelompok apomorfi, serta 4 kelompok automorfi. Sampel dari Carcinoscorpius rotundicauda memiliki nilai similaritas 100%. Kemelimpahan jenis Carsinoscorpius rotundicauda di Pantai Batah Timur berpotensi sebagai daya tarik eko-wisata berbasis edukasi bagi masyarakat Jawa Timur.
Keanekaragaman dan Kelimpahan Gastropoda Khas Pantai the Legend Kabupaten Pamekasan Madura Afnani, Royhan; Rahayu, Dwi Anggorowati
Sains dan Matematika Vol. 9 No. 1 (2024): April, Sains & Matematika
Publisher : Universitas Negeri Surabaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.26740/sainsmat.v9n1.p16-21

Abstract

Pantai The Legend merupakan objek destinasi wisata baru yang berada di Kabupaten Pamekasan yang memiliki potensi alam yang melimpah dan menarik dengan adanya kekayaan alam khususnya Gastropoda. Hingga kini belum ada rekam database potensi alam tersebut. Penelitian ini bertujuan untuk mengidentifikasi spesies, keanekaragaman, dan kelimpahan Gastropoda di Pantai the Legend Kabupaten Pamekasan Madura. Pengambilan sampel di lakukan di Pantai the Legend Pamekasan dengan metode transek yang terdiri dari 3 stasiun dengan jumlah total plot sebanyak 27 plot di tiga zona intertidal. Hasil penelitian menunjukkan bahwa di Pantai the Legend Pamekasan Madura ditemukan 6 famili yang terdiri dari 12 spesies. Indeks keanekaragaman spesies Gastropoda berada dalam kategori sedang dengan nilai 2,095. Kemerataan spesies dianalisis berdasarkan indeks of eveness termasuk dalam kategori tinggi dengan nilai 0,84. Dominansi spesies dihitung dan dianalisis berdasarkan indeks Simson termasuk kategori rendah dengan nilai 0,17 yang berarti tidak ada dominansi spesies tertentu. Kelimpahan relatif spesies yang melimpah adalah Littoraria scabra (31,69%) dan kelimpahan relatif spesies terendah adalah Murex cocinnus (0,70%). Hasil pengukuran parameter pada substrat berpasir yaitu suhu perairan berkisar 29-31°C, pH air 6,0, pH substrat 6,0 dan nilai salinitas perairan 330/00. Keanekaragaman Gastropoda di Pantai the Legend tergolong sedang dan komunitasnya stabil, serta parameter fisik dan kimia perairan masih tergolong baik bagi keberlangsungan hidup komunitas Gastropoda.
Diversity of bird agroforestry species in Sapen Nusantara Conservation Park of Mount Arjuno, Pasuruan Nugroho, Endik Deni; Rahayu, Dwi Anggorowati; Ainiyah, Roisatul; Fathurrohman, Amang; Ahwan, Zainul; Dayat, Muhammad; Wibisono, Mulyono; Aji, Fafit Rahmat; Kasiman, Kasiman
Edubiotik : Jurnal Pendidikan, Biologi dan Terapan Vol. 8 No. 01 (2023): Edubiotik : Jurnal Pendidikan, Biologi dan Terapan
Publisher : Biology Education Department, Universitas Insan Budi Utomo, Malang, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.33503/ebio.v8i01.1059

Abstract

The Sapen Nusantara Conservation Park is agroforestry that has certain vegetation. The vegetation in Sapen Nusantara Protected forest park seems to support the existence of birds as wildlife that need a living habitat. The presence of birds in the Sapen Nusantara Protected Forest Park is very important in supporting agroforestry vegetation. However, until now the diversity of bird species there has not been identified and recorded properly. The forest is one of the buffer forests of Mount Arjuno protection forest, the ecosystem must be protected. This study aims to analyze the diversity of bird species in the agroforest forest area in Sapen Nusantara Conservation forest park, Ledug Village, Pasuruan. The research was conducted in July 2021 using the direct observation method (point count) on ecotourism routes by calculating and recording the trails traversed using GPS, sampling by observing walking along the path/road accompanied by predetermined observation points, identification primarily based totally on MacKinnon et al., (2010) and information on the status of its protection. Data analysis used the Shannon-Wiener diversity index, evenness index, and species richness index. The results of the study identified 18 bird species from 16 families with a total of 169 individuals. Of all the birds found, 18 species are listed in IUCN status, and 4 are listed in the protected status PP No. P.106 of 2018 and 3 species are listed in the CITES category Appendix II. It is known that the Shannon diversity index (H'=2,547) is in the medium diversity category. species evenness index (E=0.9) with a high evenness category and stable community. Then the specific wealth index (R=3.31) with the category of species richness is classified as medium. The presence of birds in the Sapen Nusantara Conservation Park Forest indicates that the ecosystem in the forest is still maintained and this cannot be separated from the role of the community, especially the Ledug Lembaga Masyarakat Desa Hutan (LMDH), which manages and maintains the forest.
The Vulnerable Fishing Cat Prionailurus viverrinus from Wonorejo Mangroves, Surabaya, Indonesia Based on Morphology and Molecular Data Kuntjoro, Sunu; Rahayu, Dwi Anggorowati; Budijastuti, Widowati; Winarsih, Winarsih
Jurnal Biodjati Vol 8 No 2 (2023): November
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v8i2.29425

Abstract

The fishing cat (Prionailurus viverrinus) is a protected animal. Currently, the population in nature is declining due to over-fishing and changes in environmental quality. The existence of this fishing cat is an interesting finding that must be immediately studied at the morphological and genetic levels for certainty of its species. This study aimed to identify fishing cat from Wonorejo Mangroves, based on morphology and Cyt b genes analysis. The results of Cyt b identification obtained a DNA sequence length of 398 bp with a similarity value of the five Prionailurus sp. samples between 96.75 to 98.97%. The identification using molecular data consisted of five variations of nucleotide bases, and the average value of the genetic distance with the ingroup was 1.0%., The Cyt b DNA markers analysis succesfully identified fishing cat from Wonorejo Mangroves as Prionailurus viverrinus. 
In Silico Study: ACE Inhibitory Activity as a Marine Animal Fatty Acid Antihypertensive Candidate Arumsari, Maharani Dyah; Sururi, Ahmad Misbakhus; Hendrata, Excelino; Kamila, Rahmadian Kahfi Zulfa; Wibowo, Dhea Mutiara Fernanda; Fajriyah, Luluatul; Rahayu, Dwi Anggorowati
Jurnal Biodjati Vol 9 No 1 (2024): May
Publisher : UIN Sunan Gunung Djati Bandung

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.15575/biodjati.v9i1.29899

Abstract

Marine life has much potential for development, especially in the medical field. Its main content is fatty acids, where fatty acids have potential as antihypertensive agents. This research aims to determine the potential of the primary fatty acids in marine biota as antihypertensive agents through an in-silico approach using molecular docking. This study uses the Angiotensin Converting Enzyme (ACE) receptor as the target protein and fatty acid ligands (myristic acid, pentadecanoic acid, eicosapentaenoic acid, linoleic acid, vaccenic acid, 11-eicosenoic acid, palmitic acid), and the control drug captopril for comparison. The initial stages of the research include protein and ligand preparation, followed by molecular docking and visualization. Potential compounds were then analyzed with Lipinski drug-likeness and PASSOnline. The research results show that eicosapentaenoic acid and linoleic acid have the potential as ACE inhibitors. PASSOnline predictions indicate that both had a high probability of being vasodilator agents. Therefore, these two fatty acids had the potential as antihypertensive agents. Further research is needed through in vitro and in vivo testing to utilize marine biota in the medical world.
Co-Authors - Ibrahim, - Abdul Basith Afnani, Moh. Royhan Afnani, Royhan Agistiana Azzahra, Athiyya Nur Ahmad Bashri Ahwan, Zainul Ainiyah, Roisatul Aji, Fafit Rahmat Aji, Fatit Rahmar Amang Fathurrohman Anissa, Ratih Khairul Arumsari, Maharani Dyah Azrianingzih, Rodiyati Azrianingzih, Rodliyati Damayanti, Ayu Elysia Dayat, Muhammad Dwi Listyorini ENDANG SUSANTINI Endik Deni Nugroho Fajriyah, Luluatul Fida Rachmadiarti Hamidah, Safira Aini Ilmi Haryono Haryono Hendrata, Excelino Herlina Fitrihidajati Ibrohim Jamilah, Yaquta Maziyatin Kamila, Rahmadian Kahfi Zulfa Kasiman, Kasiman Kautsar, Ghinahilmi Najalin Kautsaranny, Safira Khaleyla, Firas Khoiriza, Indana Nurul Kurniawati, Yusfita Mamat, Noorhidayah Binti Maramis, Arnetta Yolanda Mudloifah, Istatik Muji Sri Prastiwi Nia Kurniawan Novelia, Adelin Nugroho, Hafiidh Haqqu Nur Rohmatin Isnaningsih, Nur Rohmatin Nurdiana, Maulida Nurinsiyah, Ayu Savitri Panjaitan, Viona Angelina Erlan Rabbani, Calista Naya Rangga, Adam Dwi Reni Ambarwati Reza Ardiansyah Rinie Pratiwi Puspitawati Rodiyati Azrianingsih Rofiah Mauludiyah, Nurhidayati Rohmah, Tri Lestari Saidha Roisatul Ainiyah Rupa, Darius Rusdianto Rusdianto, Rusdianto Sonia, Shela Sulung, Cahya Ajeng Valenta Tresna Sunu Kuntjoro Sururi, Ahmad Misbakhus TARZAN PURNOMO Tresna Sulung, Cahya Ajeng Valenta Ulfi Faizah Wibisono, Mulyono Wibowo, Dhea Mutiara Fernanda WIDOWATI BUDIJASTUTI Winarsih Winarsih