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Journal of Fisheries & Marine
Published by Universitas Airlangga
ISSN : 20855842     EISSN : 25280759     DOI : https://doi.org/10.20473/jipk.v16i1.44436
Core Subject : Science,
Biochemistry, Genetics & Molecular Biology
Jurnal Ilmiah Perikanan dan Kelautan (JIPK; English: Scientific Journal of Fisheries and Marine) ISSN International Centre | ISSN:2528-0759 (Online) | ISSN: 2085-5842 (Print) JIPK is a peer-reviewed and open access biannually (April and November) that published by the Faculty of Fisheries and Marine, Universitas Airlangga. The aim of JIPK is to publish exciting, empirical research, recent science development, and high-quality science that addresses fundamental questions in fisheries and marine. JIPK only accepts manuscripts written in full English and processes submitted original script related of scope to fisheries and marine science and not being published by other publishers. We publish four categories of papers; 1) Original research papers, 2) Critical review articles, 3) Short communications, and, 4) Special Issue on applied or scientific research relevant to freshwater, brackish and marine environments. This journal gives readers the state of art of the theory and its applications of all aspects of fisheries and marine science. The scope of this journal includes, but is not limited to the research results of: Aquaculture, Fish Diseases, Marine science, Oceanography, Aquatic resources management, Fisheries product technology, Fish capture, technology, Fishery agribusiness, Fishery biotechnology/molecular genetics, Fish health management. JIPK has been indexed in Scopus, DOAJ, Sinta 1, Dimensions, Crossref, and others indexing. This journal has been accredited as a 1st Grade Scientific Journal (Sinta 1) by the Ministry of Research, Technology, and Higher Education of Indonesia since 8 December 2020.
Arjuna Subject : Biokimia, Genetika dan Biologi Molekuler - Biokimia
Articles 560 Documents
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Biochemical Processes of Chlorella vulgaris and Their Impact on Chlorophyll Quality and Antioxidant Properties Iriani, Dian; Feliatra; Hasan, Bustari; Karnila, Rahman; Chaiyanate, Nittaya; Rozi
Jurnal Ilmiah Perikanan dan Kelautan Vol. 17 No. 1 (2025): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.vi.61083

Abstract

Graphical Abstract Highlight Research Chlorella indigenous from waters of Rokan River estuary was identified. The using of 4 chemicals KNO3, KH2PO4, MgSO4.7H2O and FeSO4.7H2O can reduce production cost and obtain an optimal medium formulation. The manipulated media was obtained can replace the commercial media of Chlorella Chlorella vulgaris contains high antioxidant activity.   Abstract Chlorella is a microalga that is rich in chlorophyll and antioxidants so it has the potential to be a functional food or health supplement; however, the quality of Chlorella depends on the nutrient composition in cultivation. The research aimed to evaluate the effect of different formulations in Chlorella cultivation on the content of chlorophyll a, chlorophyll b, total chlorophyll, carotenoids and antioxidants. Furthermore, to analyse the profile of amino acids, fatty acids and secondary metabolism in the best formulation. The experimental design used was a non-factorial Completely Randomized Design (CRD) with 5 formulations in Chlorella cultivation: F-1, F-2, F-3, F-4, and F-5 by manipulating the use of 4 chemicals: KNO3, KH2PO4, MgSO4.7H2O and FeSO4.7H2O. The data obtained were analyzed descriptively and analysis of variance (ANOVA). The results showed that F-2 treatment with the use of 1.50 KNO3, 1.25 KH2PO4, 1 MgSO4.7H2O and 0.0498 FeSO4.7H2O (g/L) was the best treatment with the content of chlorophyll a 38.19 μg/mL, chlorophyll b 41.45 μg/mL, total chlorophyll 79.65 μg/mL, carotenoids 0.08 μg/mL, and antioxidants activity 49.52 mg/L (strong) which is the same as the F-1 treatment. In addition, Chlorella cultivated with the F-2 formula has 17 amino acid profiles with a total of 301.52 mg/g, 7 fatty acids 84.32 mg/g, and secondary metabolites, namely alkaloid 109.471 mg/L, flavonoid 82.111 mg/L, saponin 1342.222 mg/L, tannin 411,591 mg/L, and phenolic 151.889 mg/L. Therefore, the F-2 formulation can be developed for large-scale Chlorella cultivation and applied as a health supplement.
The Effects of Depth and Habitats on Bycatch Distribution in Deployed Fish Traps in Bidong Archipelago, Terengganu – Peninsular Malaysia Mas'ud, Aiman; Alfeera, Nur; Nasir, Haslina; Azra, MN; Kamaruzzaman, Yeny; HISAM, FAZRUL
Jurnal Ilmiah Perikanan dan Kelautan Vol. 16 No. 2 (2024): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v16i2.47872

Abstract

Graphical Abstract Highlight Research 1. Fish traps at 20 m depth captured the highest species diversity, while 10 m had the most bycatch abundance. 2. Habitat type strongly influenced bycatch composition and species richness, with differences across the study stations. 3. Artisanal fish traps captured a wide range of species, indicating non-selectivity in fishing. 4. Bycatch composition varied with depth, with demersal species being predominant at greater depths. 5. The study recommends management strategies like time-release mechanisms to minimize the ecological impact of fish traps.   AbstractIn many marine ecosystems, the fish population has been correlated to bycatch related activities, the most frequently fisheries activities in Malaysia, while the relative importance of other factors such as the depth of artisanal fish trap remains understudied. We investigate whether the bycatch distribution would be affected by deployment of artisanal fish trap at different depths, placed at extensively studied marine educational university station, the Bidong Island, East Coast of Peninsular Malaysia, Terengganu. The traditional artisanal fish trap with a dimension of 1.52 m x 0.92 m x 0.92 m with the wooden frame and the oval shape funnel with a diameter of 25 cm x 6 cm and 25 cm of entrance depth were used for sample collection. The results show that there are six families, six genera and seven species of fish were successfully captured with a 20 m depth captured more fish species compared to others (i.e., 10 m and 15 m depth). The findings of this study provide evidence of the relationship of fish trap depths and fish distribution in the wild. This information could be useful for fishermen for further deployment of their fish trap within the sampling areas in the future.
The Diversity and Distribution of Sponges in Three Different Islands at the Makassar Strait, Indonesia Sukri, Nurul Magfirah; Priawandiputra, Windra; Atmowidi, Tri; Litaay, Magdalena
Jurnal Ilmiah Perikanan dan Kelautan Vol. 17 No. 1 (2025): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.vi.55675

Abstract

Graphical Abstract   Highlight Research Approximately 3978 sponge individuals were collected and grouped to 137 morphospecies, with 120 of these have been identified intothree classes, 17 orders, 40 families, and at least 70 genera. Sponges in the Makassar Strait showed significant differences based on individual abundance data. Pannikiang Island had the greatest abundance and diversity of sponges, and the lowest found in Gusung Toraja. The sponge composition of the three islands indicated that neighboring islands do not guarantee high similarity.     Abstract Sponges are an important and dominant component of marine benthos which are threatened due to global environmental degradation. To establish appropriate conservation policies, the diversity and distribution of sponge must be understood. Meanwhile, the availability of sponge diversity and distribution especially in the Makassar Strait, is still lacking. This study aimed to investigated the diversity and distribution of the sponges composition in coral reef ecosystems on three less-explored islands in the Makassar Strait (South and West Sulawesi provinces, Indonesia). Sponge assemblages were sampled at a depth of 5 m using Underwater Photo Transect method, with a total area of 15 m2 at each site. We recorded a total of 137 morphospecies of sponges (N = 3978 individuals), 59 of which were restricted to Barrang Caddi, 39 to Gusung Toraja, and 92 to Pannikiang. Only 12 species were shared among all islands. We found ten morphological types of sponge, with the dominant type in all islands was encrusting. Our results showed that Pannikiang island represents the  highest diversity and abundance of sponges, which had the largest area compared to the other islands and is surrounded by mangrove forests. There was a significant difference in species composition between Pannikiang and other islands.
Harvesting Optimization, Biomass, and Lipid Content Analysis of Euglena sp. Culture with Ettlia texensis Bioflocculant and Commercial Chitosan Agus Suyono, Eko; Mudrikah, Siti; Karilanata, Khalid Erlangga; Kurnianto, Dedy; Budiman, Arief; Dewayanto , Nugroho; Putri, Renata Adaranyssa Egistha; Sadewo , Brilian Ryan; Erfianti, Tia
Jurnal Ilmiah Perikanan dan Kelautan Vol. 17 No. 2 (2025): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v17i2.57417

Abstract

Graphical Abstract   Highlight Research  Bioflocculation technique can improve the harvesting effectiveness of semimass culture of Euglena sp. The addition of E. texensis can significantly increase the flocculation efficiency of Euglena sp. The addition of commercial chitosan was able to increase the flocculation efficiency of Euglena sp. The biomass and lipid content produced by Euglena sp. with E. texensis flocculant agent showed higher results than the biomass and lipid content produced by Euglena sp. with commercial chitosan flocculant agent.   Abstract Euglena sp. has a high potential to be developed as biofuel. However, the high cost and energy required for the harvesting process are hindering the production. Flocculation using natural substances, such as microorganisms and biopolymers, offers a promising solution to minimize energy and production costs, so it is applicable on a mass scale. Ettlia texensis is one of the autoflocculating microalgae that can excrete extracellular polymeric substances (EPS). Chitosan is a linear copolymer of D-glucosamine and N-acetyl-D-glucosamine produced by the deacetylation of chitin, which is usually exploited by marine crustaceans, shrimp, and crabs. Chitosan has a very high cation load, so it is often used for coagulation or flocculation. This study explores the potential of E. texensis and chitosan as flocculant agents to harvest the mass culture of Euglena sp. by giving different doses E. texensis with 1:0.25 (E3), 1:0.5 (E4), 1:1 (E5), and 1:2 (E6), and chitosan with 1.25 mg (C1), 2.5 mg (C2), 3.75 mg (C3), and 5 mg (C4). This research began with the cultivation of Euglena sp. and E. texensis on a 50 L scale for 12 days. The effectiveness of flocculation was measured by the spectrophotometric method. Based on this research, the best treatment for harvesting Euglena sp. culture by bioflocculation was shown by the addition of chitosan (5 mg) with the recovery of 84.83%, 0.2213 mg/mL biomass, and 0.2117 mg/mL lipid content. Meanwhile, with E.  texensis, the best was shown by the ratio of 1:2 with recovery 84.71%, 0.2053 mg/mL biomass, and 0.1753 mg/mL
Effect of Different Papain Concentrations on Yield and Quality of Tuna Eye Oil Trilaksani, Wini; Nurhayati, Tati; Santoso, Joko; Riyanto, Bambang; Fauziah, Silva; Sinulingga, Fahri
Jurnal Ilmiah Perikanan dan Kelautan Vol. 17 No. 2 (2025): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v17i2.57637

Abstract

Graphical Abstract Highlight Research Innovative Use of By-Products: The study explores the use of tuna eye by-products, a rich source of docosahexaenoic acid (DHA), to reduce reliance on imported fish oil and promote sustainable utilization of fishery waste. Enhanced Extraction Methodology: Enzymatic extraction using papain at optimal concentrations significantly improves the yield and quality of tuna eye oil, achieving up to six times higher yield compared to other methods. Nutritional and Quality Benefits: The extracted oil demonstrated low Index of Atherogenicity (IA) and Index of Thrombogenicity (IT), indicating its potential as a heart-healthy dietary supplement, with DHA and EPA concentrations well preserved. Environmental and Safety Advantages: The enzymatic process is solvent-free, minimizing environmental impact and ensuring consumer safety, while also addressing challenges posed by extended sample storage during the COVID-19 pandemic. Abstract Docosahexaenoic acid (DHA), a crucial omega-3 fatty acid, plays a vital role in neurodevelopment and cardiovascular health. Indonesia relies heavily on imported fish oil, despite its significant potential in underutilized by-products like tuna eyes. This study investigates the optimization of papain enzyme concentration for enzymatic extraction of DHA-rich oil from tuna eyes, aiming to enhance yield and maintain quality. Using 1% papain at 55°C for 1 hour, the optimized process achieved an oil yield of 8.59 ± 0.69%, six times higher than cold extraction without enzymes. The extracted oil exhibited high oxidative stability with low Index of Atherogenicity (IA: 0.38–0.40) and Index of Thrombogenicity (IT: 0.20–0.21), while DHA content remained well-preserved at 27.82%. This method also demonstrated the capability to maintain oil quality even after prolonged storage during the COVID-19 pandemic. Compared to conventional methods, enzymatic extraction provides a sustainable and efficient alternative by reducing chemical solvent use, minimizing environmental impact, and maximizing the utilization of fishery by-products. These findings offer a scalable solution for producing high-value omega-3 oils, contributing to global dietary needs and promoting sustainability in the fishery industry.
Sustainability of Small-Scale Capture Fisheries Based on Coastal Vulnerability in Pangpang Bay, Banyuwangi Regency, Indonesia Setyaningrum, Ervina Wahyu; Sambah, Abu Bakar; Wiadnya , Dewa Gede Raka
Jurnal Ilmiah Perikanan dan Kelautan Vol. 17 No. 2 (2025): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v17i2.57946

Abstract

Graphical Abstract Highlight Research Climate change impacts on coastal vulnerability. Low coastal vulnerability in Pangpang Bay, Banyuwangi Regency. Sustainability of small-scale capture fisheries based on vulnerability. Sustainable small-scale fisheries management. Abstract Teluk Pangpang is one of the water areas that has considerable potential for capturing fisheriesin Banyuwangi Regency, Indonesia. On the other hand, climate change impacts the vulnerability of coastal areas and coastal communities, especially small-scale fishers. This study aims to analyse the coastal vulnerability of Pangpang Bay and formulate a sustainable development plan for small-scale capture fisheries in Pangpang Bay. The research method used a descriptive method with a quantitative approach. Data collection techniques used geographic information systems and focus group discussions (FGDs). The data analysis used was Coastal Vulnerability Index (CVI) analysis with a spatial approach and Participatory Prospective Analysis (PPA). From the CVI analysis, through the assessment of geomorphological parameters, erosion/accretion, coastal slope, distance of plants from the beach, wave height, and average tide range, the level of coastal vulnerability of Teluk Pangpang is included in the low category. Meanwhile, the PPA analysis resulted in seven variables that most influence the sustainability of small-scale capture fisheries, namely climate change, coastal vulnerability, coral reef area and density, number of small-scale fishers, catches, human resources of small-scale fishers, and management of small-scale fisheries resources. Furthermore, the formulation of the sustainability scenario of smallscale capture fisheries in Pangpang Bay is to minimise the impact of climate change and conduct disaster mitigation, improve the human resources of smallscale fishers, and equalise perceptions as outlined in the commitment between all interested parties and small-scale fishing communities.
Designing of a Novel Aerolysin-based Multiepitope Vaccine against Aeromonas hydrophila Isolated from Osphronemus goramy Using Reverse Vaccinology: an in Silico Approaches Rozi; Tyasningsih, Wiwiek; Rahmahani, Jola; Aksono, Eduardus Bimo; Yunus , Muchammad; Al-Arif, Mohammad Anam; Kuncorojati, Suryo; Kusdarwati, Rahayu; Sari, Putri Desi Wulan; Amal, Mohammad Noor Azmai; Salleh, Annas; Khanand, Nadeem; Suwarno
Jurnal Ilmiah Perikanan dan Kelautan Vol. 16 No. 2 (2024): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v16i2.62035

Abstract

Graphical Abstract Highlight Research The study aims to develop a multi-epitope vaccine (MEV) against A. hydrophila by targeting the aerolysin toxin, a key virulence factor responsible for infections in fish and humans. Computational methods identified and optimized B-cell and T-cell epitopes, focusing on their ability to trigger immune responses without causing toxicity or allergenicity. In silico simulations demonstrated that the MEV has a strong binding affinity to immune receptors like TLR-4, MHC-I, and MHC-II, indicating its potential to induce robust cellular and humoral immunity. Structural analysis of the MEV showed a stable 3D conformation, with most residues in favorable regions, ensuring stability during immune activation. The MEV could enhance disease control in aquaculture and reduce human infection risks, offering a promising solution to address antibiotic resistance and the absence of effective vaccines. Abstract Aeromonas hydrophila, gram-negative, is a major pathogen responsible for various diseases in mammals, reptiles, amphibia, and vertebrates, including fish and humans. Targeting the specific toxin aerolysin in A. hydrophila is crucial to address antibiotic resistance and the lack of adequate and protective vaccines against this intracellular pathogen. This study aimed to identify a multi-epitope vaccination (MEV) candidate targeting A. hydrophila aerolysin toxin to combat the disease effectively. Standard biochemical characterization methods and sequencing of the 16S rRNA, rpoB, and aerA genes identified the isolate AHSA1 as A. hydrophila. Subsequently, we identified B and T cell epitopes on the aerolysin protein and separately predicted MHC-I and MHC-II epitopes. The epitopes are then evaluated for toxicity, antigenicity, allergenicity, and solubility. The vaccine design integrated multi-epitope-based constructs, utilizing specialized linkers (GPGPG) and EAAAK linkers to connect epitope peptides with adjuvants in the cholera toxin B component, thereby enhancing immunogenicity. Ramachandran plots showed that 85.25% of the residues were located in the most favorable regions, which was followed by the generously allowed zone (1.30%), the additional allowed regions (10.80%), and the forbidden regions (2.65%), thus confirming the feasibility of the modeled vaccine design. Based on docking simulations, MEV had the highest binding and interaction energies with TLR-4, TLR-9, MHC-I, and MHC-II (-1081.4, -723.2, 866.2, -9043.3 kcal/mol). Based on computational modelling, we expect the Aerolysin MEV candidate design to activate diverse immune mechanisms, stimulate robust responses against A. hydrophila, and maintain safety. The significant solubility, absence of toxicity or allergic response, and minimal side effects in animal testing all contribute to the potential clinical utility of this vaccine candidate.  
Framework for Sustainable Management of Shellfish Resources Based on Eco-Biology and Socio-Economic Conditions in Sedati, Sidoarjo, Indonesia Pursetyo, Kustiawan Tri; Idris, Mohd Hanafi; Zein, Alfian; Masithah, Endang Dewi
Jurnal Ilmiah Perikanan dan Kelautan Vol. 17 No. 1 (2025): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.vi.62841

Abstract

Graphical Abstract   Highlight Research  Sustainable Management: Developing strategies for the long-term sustainability of shellfish resources in Sedati, Sidoarjo. Eco-Biological Considerations: Emphasizing the role of ecological and biological factors in managing shellfish populations. Socio-Economic Integration: Balancing economic activities and community welfare with the preservation of shellfish resources. Regional Focus: Tailoring management practices specifically to the unique environmental and social conditions of Sedati, Sidoarjo.     Abstract Sedati is one of the subdistricts producing fishery products, namely milkfish, shrimp, and shellfish. Some of the products are further processed generate long-term income. Economic variables profoundly influence shellfish harvesting, as heightened catches immediately enhance fishermen's revenue. Nonetheless, increased income may lead to intensified fishing activities, potentially jeopardizing the viability of shellfish populations if not adequately regulated. This study develop to the framework for sustainable management of shellfish resources based on eco-biology and socio-economic conditions. This research used a survey research method with primary and secondary data. The samples collected from this study were spread across 224 respondents who are fishermen. The hauling process is carried out while catching shellfish 100-150 times. Shellfish fishing activities are carried out 20–26 days a month. This study found that catch factors having no significant effect on sustainable fisheries management, ecological factors and shellfish capture and sustainable fisheries and sustainable fisheries management social factors and the capture of shellfish. Biological factors and shellfish catchment and management economic factors influence the shellfish capture showed significant influence on the fisheries management. The development of this model can serve as a benchmark for shellfish fishing activity in this coastal water. Overfishing or activities in this area can be monitored using this model. The purpose is to control or monitor the stock and the inventory of the shellfish fisheries to preserve them for further use. Economic factors have a significant effect on shellfish caching because the more shellfish caught, the income of shellfish fishermen will directly increase, economic factors also have a significant influence on the sustainable management of shellfish. The greater the income of fishermen, the greater the availability of shellfish stocks will be because the fishing effort carried out by fishermen will be massive. This research in the future can provide information on how to balance ecological, economic, and social factors to ensure the long-term viability of shellfish populations and the ecosystem support.
Front Meter Vol 16 No 2 Rozi
Jurnal Ilmiah Perikanan dan Kelautan Vol. 16 No. 2 (2024): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v16i2.64598

Abstract

Back Meter Vol 16 No 2 Rozi
Jurnal Ilmiah Perikanan dan Kelautan Vol. 16 No. 2 (2024): JURNAL ILMIAH PERIKANAN DAN KELAUTAN
Publisher : Faculty of Fisheries and Marine Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/jipk.v16i2.64599

Abstract

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