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Analisis Fragmen Gen VP-2 Virus Infectious Bursal Diseases yang Diisolasi dari Peternakan Ayam Komersial Michael Haryadi Wibowo; Dito Anggoro; Sarwo Edy Wibowo; Purnama Edy Santosa; Surya Amanu; Widya Asmara
Acta VETERINARIA Indonesiana Vol. 5 No. 1 (2017): Januari 2017
Publisher : IPB University

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (378.584 KB) | DOI: 10.29244/avi.5.1.47-56

Abstract

Infectious Bursal Disease (IBD) adalah penyakit virus yang bersifat akut dan infeksius serta menyerang pada unggas muda yang berumur kurang dari 4 bulan. Sejauh ini data molekuler virus IBD isolat Indonesia sangat minim, oleh karena itu penelitian ini bertujuan untuk mengidentifikasi dan mengarakterisasi gen VP-2 virus IBD yang telah ada di Indonesia. Sampel penelitian diperoleh dari kasus terdiagnosa IBD yang terjadi di peternakan ayam komersial broiler dan layer. Sampel Bursa dipersiapkan untuk dilakukan isolasi menggunakan telur ayam berembrio SPF. Membran korioalantois dipanen dan dilakukan identifikasi dengan metode RT-PCR dengan gen target VP-2. Hasil amplifikasi selanjutnya dilakukan pengurutan DNA. Data nukleotida hasil pengurutan DNA dianalisis dengan program MEGA 6, meliputi pesejajaran, prediksi asam amino, dan konstruksi pohon kekerabatan antara virus yang diteliti dengan beberapa virus yang telah dipublikasi di bank gen terutama virus IBD yang bersirkulasi di Indonesia. Hasil penelitian ini diperoleh data bahwa ayam yang terdiagnosis penyakit IBD dapat ditentukan penyebabnya sebagai virus IBD. Hasil analisis urutan penanda patogenisitas molekuler menunjukkan virus yang virulen. Analisis pohon kekerabatan 2 isolat IBD SR/Lay-WNO-DIY dan IBD Potrow/Lay-SLM-DIY termasuk dalam kelompok virus IBD tipe klasik, sedangkan lima virus lainnya, yaitu IBD Yanti/Lay-SLM-DIY; IBD Lampung/Bro/IL; IBD Fung/Lay-SLM-DIY-BF1, IBD Fung/Lay-SLM-DIY-BF2, dan IBD Fung/Lay-SLM-DIY-BF3 termasuk dalam kelompok vvIBD strain Indonesia.
Penentuan Patogenesitas Molekuler Virus Newcastle Disease yang Diisolasi dari Ayam Komersial Tahun 2013-2016 Sarwo Edy Wibowo; Michael Haryadi Wibowo; Bambang Sutrisno
Acta VETERINARIA Indonesiana Vol. 5 No. 2 (2017): Juli 2017
Publisher : IPB University

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (653.372 KB) | DOI: 10.29244/avi.5.2.105-119

Abstract

Newcastle Disease (ND) atau yang dikenal dengan “Tetelo” masih menjadi masalah di peternakan unggas komersil, meskipun telah dilakukan vaksinasi ND secara rutin, namun wabah ND masih tetap terjadi. Penelitian ini bertujuan untuk mengetahui patogenesitas molekuler dan genotipe virus ND berdasarkan analisis sekuen fragmen gen F, serta melihat hubungan kekerabatan antara isolat dalam penelitian dengan isolat ND di Indonesia sebelumnya serta strain vaksin pada peternakan ayam yang menerapkan vaksinasi ND secara berkala. Penelitian ini menggunakan primer yang didesain dengan konsensus fragmen gen F dari GenBank dan desain dengan aplikasi amplifX pada posisi 91-800 nt dengan panjang 710bp. Urutan basa pada primer kemudian di cek dengan BLAST primer dan di uji spesifisitas dengan beberapa virus penyakit unggas yaitu vaksin infectious bronchitis (IB) 120, virus vaksin infectious laryngotracheitis (ILT), virus vaksin avian influenza (AI), dan virus vaksin infectious bursal disease (IBD). Delapan sampel paru diperoleh dari delapan peternakan ayam komersial di Yogyakarta, Semarang, Jakarta, Magelang dan Muntilan. Tiga sampel diisolasi pada telur ayam berembrio dan diidentifikasi menggunakan uji HA dan HI. Lima sampel lain dilakukan ekstraksi secara langsung dari gerusan organ paru. Sampel di identifikasi dengan metode reverse transciptase-polymerase chain reaction (RT-PCR) untuk mendeteksi gen F menggunakan  primer forward 5’ TCT CTT GAT GGC AGG CCT CTT G ‘3 dan reverse 5’ CCG CTA CCG ATT AAT GAG CTG AGT’3 dengan panjang produk 710 bp. Hasil penelitian menunjukkan bahwa seluruh sampel positif virus ND. Analisis hasil sekuen dengan menggunakan perangkat lunak MEGA v.7 didapatkan susunan asam amino penyusun cleavage site 112RRQKR↓F117 dan 112RRRKR↓F117yang menunjukkan bahwa virus ND tersebut digolongkan strain velogenik. Berdasarkan analisis pohon filogenetik isolat ND-Layer/GK-SR1/2013, ND-Lay/Pullet-80/ 27/16 (N), ND-Bro/Lingga 2L/24/2 (N), dan ND-Lay/Smg-P/2015 merupakan genotip VIIi, sedangkan 3 isolat ND yaitu ND-Bro/Yog-P/2015, JKT/P1/2016 (Jakarta), dan JKT/P2/2016 (Jakarta) merupakan ND genotip VIIh. Jarak genetik isolat yang diteliti dengan virus ND Indonesia yang pernah dilaporkan sebelumnya pada fragmen gen F posisi 91-798 berkisar 0,4 – 9,6 % dengan tingkat homologi mencapai 90,4 – 99,5%.
Comparation Protection Level of Newcastle Disease in Broiler Sarwo Edy Wibowo; Widya Asmara; Michael Haryadi Wibowo; Bambang Sutrisno
Jurnal Sain Veteriner Vol 31, No 1 (2013): JULI
Publisher : Fakultas Kedokteran Hewan Universitas Gadjah Mada bekerjasama dengan PB PDHI

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (1180.682 KB) | DOI: 10.22146/jsv.2625

Abstract

Newcastle Disease (ND) is both  respiratory and digestive diseases in poultry caused by avian paramyxovirus type 1 (APMV-1). Field data showedthat there were still many cases of Newcastle Disease faced by farmers despite of vaccination programs had been  doneroutinely. The aim of this research is to find out the effectiveness of  some routine ND vaccination program in broiler chiken challengedeither with viscerotropic velogenic Newcastle Disease (VVND) virus or virulent ND virus from field isolates. One hundred broiler chickens were divided into 4 groups of 25 each. In theGroup I,vaccination was carried out at day 1 with combination of ND-IB live vaccineand ND killed vaccine, and booster at day 18 with live ND vaccine, in the Group II, chickens were vaccinated with live ND-IB vaccine at day 1 and day 18 and  in the Group III, chickens  were vaccinated with live ND-IB vaccine at day 1 and vaccinated with ND live vaccine at day 18. Challenge test performed in twenty broiler chickens of each group with virulent ND that has chicken lethal dose fifty (CLD50) 4,8. Virus preparation 26 and then diluted to 10-4, to obtain dilution 10000. Twenty chicken from each group were then given 0.5 cc dilution of 6 HA virulent virus at 28 days of old. Six challenged chicken from group I showed ND clinical symptom and were eventually death.  This mean that the vaccine program provided 70% protection. Whereas all challenged chicken from the Groups II and III were sick, then died meaning that these vaccination programs did not give any protection at all. Bsed on the present study, it is concluded that the administration of ND live vaccine priming along with ND killed vaccine is needed to improve the protection against velogenic NDV.    
Nutritional Content Analysis of Tofu Waste in Catfish (Pangasionodon hypophthalmus) Farmer Tangkit Baru Jambi Bs Monica Arfiana; Sarwo Edy Wibowo; Wulandari Wulandari; Dyah Muji Rahayu; Yatno Yatno
Sriwijaya Journal of Environment Vol 7, No 3 (2022): SOCIAL AND ENVIROMENTAL HEALTH
Publisher : Program Pascasarjana Universitas Sriwijaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22135/sje.2022.7.3.142-147

Abstract

One of the factors behind the declining catfish farm in Tangkit Baru, Jambi, is the rising price of commercial feed. A lot of fish farmers stop their cultivation. They make independent feed formulations based on existing sources around them. The lack of knowledge and understanding of feed nutrition causes the feed formulations not necessarily with feed standards (SNI) and feed commercial. Nutritious feed is essential for fish growth. The aim is to compare the nutrition of the tofu waste processed for local fish farmers, "Usaha Mandiri" in Tangkit Baru, with catfish feed standards and commercial. Fish feed produced by local fish farmers consists of 2 (two) types of pellets, it is pellet one consists of tofu waste and salted fish (50%:50%), and pellet two consists of a mixture of tofu waste, rice bran, and salted fish (30%: 20%: 50%). Measurement of feed nutrition includes crude protein (AOAC method, 2011); crude fat (SNI method 01-2891-1992); crude fiber (SNI method 01-2891-1992); ash content (AOAC method, 2005), and water content (AOAC method, 2005). The measurement results showed that the nutritional content in pellet one and pellet two, respectively, included crude protein (27.83%; 16.91%), crude fat (8.25%; 5.21%), crude fiber (5.71%; 5.49%), ash content (14.93%; 16.96%); and water content (29.59%; 26.23%). The nutritional content of pellet 1 was better than pellet 2, except for the ash content. The local pellet was by commercial feed and SNI 7548 (2009); pellet 1 is still feasible as an alternative feed for catfish farms.
Investigation of tick-borne pathogen in goats, case study in Samigaluh, Kulon Progo, Yogyakarta Yudhi Ratna Nugraheni; Rochmadiyanto; Apinya Arnuphapprasert; Dwi Priyowidodo; Nur Muhamad; Sarwo Edy Wibowo
Jurnal Ilmu Peternakan Terapan Vol 6 No 2 (2023): Jurnal Ilmu Peternakan Terapan
Publisher : Politeknik Negeri Jember

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.25047/jipt.v6i2.3722

Abstract

Tick-borne pathogens of the genus Theileria and Anaplasma has been widely distributed and infect small ruminant in tropical and subtropical countries. Several species are considered highly pathogenic, while some cause subclinical infections in small ruminants. The distribution data of theileriosis and anaplasmosis in Samigaluh, Kulon Progo remain scarce and poorly understood. Therefore, further investigations are required to control this tick-borne disease. This study aimed to investigate the occurrence of theileriosis and anaplasmosis in domestic goats in Samigaluh, Kulon Progo, Western Yogyakarta. A total of 53 blood samples were collected from domestic goats. Blood sample was drawn from the jugular vein individually and kept in an EDTA tube. Thin blood smear was stained by Giemsa and observed under microscope for genus-level identification. As a result, it was found that theileriosis 12/53 (23%), anaplasmosis 25/53 (47%) and mixed infection 6/53 (11%) were detected in the present study.The conclusion of this study is that the incidence of Anaplasma sp. infection in goats is greater than Theileria sp. infection in Samigaluh, Kulon Progo.Although all domestic goats were asymptomatic, the finding of this study may shed light on the distribution of theileriosis and anaplasmosis infecting domestic goats in Samigaluh, Kulon Progo.
Spatiotemporal Dynamic of Ostreococcus lucimarinus in IMTA System at Enclosed Sea (Hangzhou Bay) East China Sea Using Environmental DNA (eDNA) Dyah Muji Rahayu; Peimin He; Kejun Li; Jinlin Liu; Sarwo Edy Wibowo; Ester Restiana Endang Gelis; Bs Monica Arfiana
Sriwijaya Journal of Environment Vol 8, No 2 (2023): ENVIRONMENTAL TECHNOLOGY
Publisher : Program Pascasarjana Universitas Sriwijaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22135/sje.2023.8.2.64-69

Abstract

Integrated Multi-Trophic Aquaculture (IMTA) is growing fast in China, in order for cultivation with this system to continue. Through eDNA approach in able to detect Ostreococcus lucimarinus which include picoeukaryotic in IMTA system at enclosed sea (Hangzhou Bay). Information about this species and their ecological placement in the IMTA system is still very limited. eDNA is an ecological approach that can detect supply down to the species level in monitoring aquatic ecology in the IMTA system. The purpose of this study was to determine the taxonomy and guarantees of Ostreococcus lucimarinus and the role of this species in the IMTA system descriptively. Through high throughput sequencing, the taxonomic results of Ostreococcus lucimarinus and confinement of this picoekaryotic species were highest in winter with a total of 599,632 ind. Based on the sampling location, the highest abundance were in aquaculture areas of 337,165 ind. The approach using eDNA has proven to be capable of detecting up to the species level as well as spatiotemporal abundance dynamics of Ostreococcus lucimarinus.
The Gastrointestinal Parasite Cow in The Work Area of UPTD Laboratory of Animal and Veterinary Public Health in Jambi Province in 2020-2022 Sarwo Edy Wibowo; Yudhi Ratna; Aan Awaludin; Fathur Rohman Haryadi; Zurbein Zurbein
Journal of Applied Veterinary Science And Technology Vol. 4 No. 2 (2023): October 2023
Publisher : Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/javest.V4.I2.2023.74-79

Abstract

Background: Jambi Province consists of 11 regencies and cities, which have a quite high potential for cattle breeding because the availability of natural feed for livestock is still very abundant. Jambi province has high rainfall and humidity. High rainfall and humidity cause the growth of helminth eggs, which can infect the digestive tract of cows. Helminths infestation in the digestive tract can cause damage to the intestinal mucosa, which can reduce the efficiency of absorption of food, causing a loss in cattle productivity in body weight, milk production, and meat quality. Purpose: This study aimed to determine the incidence of helminthiasis and the types of worms that infect livestock in the work area UPTD Laboratory of Animal and Veterinary Public Health Jambi Province. Methods: A total of 2.720 feces were screened for parasite digestive tract in this study using floating and sedimentation methods. Results: It was found that the highest prevalence in 2020 occurred in Bungo Regency, which was 4.47%, while the lowest was in Sarolangun Regency, which was 0%. In 2021, the highest prevalence was in Jambi City, which was 7%, while the lowest was in Tanjung Jabung Barat Regency, which was 0.28%. The highest prevalence in 2022 will be in Jambi City, which is 6.19%, while the lowest will be in Sungai Full City, which is 0.52%. The type of helminth that infected cattle in 2020-2022 is Paramphistomum sp., with as many as 87, 48, and 205 cases, with the highest incidence in Bungo Regency, namely 23 cases, while Jambi City, namely, 21 and 51 cases. Conclusion: The highest incidence of helminthiasis in Jambi City, with the highest identified type of helminth egg, was Paramphistomum sp.
Trypanosoma evansi Infection in Sumba Horses in East Sumba Regency : A Study at BBVet Denpasar Sarwo Edy Wibowo; Fahmida Manin; Anie Insulistyowati; Fadel Muhammad Priyatna; Yudhi Ratna Nugraheni; Paradewa Baskara; Aan Awaludin
Journal of Applied Veterinary Science And Technology Vol. 5 No. 1 (2024): April 2024
Publisher : Universitas Airlangga

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20473/javest.V5.I1.2024.60-65

Abstract

Background: Sumba is one of the original habitats of the Sandalwood Ponies and the presence of pony is an important element for the community. The Sumbanese herd their ponies in the savanna and rely on nature as a source of horse feed, consequently, during the dry season, the availability of the feed decreases. These conditions can potentially reduce the health status of ponies and increase morbidity or mortality from diseases caused by Trypanosoma evansi. Purpose: This study aims to determine the occurrence and intensity of Trypanosoma evansi infection in blood samples from horses examined at the Denpasar Bali Veterinary Centre. Methods: Thirty blood samples were collected from East Sumba Regency. Three milliliters of blood were taken from the jugular vein and immediately transferred into an ethylenediaminetetraacetic acid tube. Thin blood smears were subsequently prepared and examined using the Giemsa-stained blood smears method. The preparations of blood smear were examined under microscope to determine the Trypanosoma evansi infection and the intensity was calculated on the average number of Trypanosoma evansi in 100 red blood cells. Results: The result showed that six out of 30 horses were tested positive for Trypanosoma evansi. The infection intensity ranged from two to 18 parasites with an average number of 8 in the blood smear examination method. Conclusion: The incidence of trypanosomiasis in Sumba horses varies with each season in East Sumba Regency. The prophylactic measures that should be adopted in the particular herd of horses because this is the most significant blood protozoan parasite of equines.
Assessment of Water Quality in Jambi Coastal Areas Through Pollution Index Analysis Dyah Muji Rahayu; Tri Suryono; Hasanah; Robin; Septy Heltria; Wulandari; Sarwo Edy Wibowo; M Hariski; Ester Restiana Endang Gelis
Indonesian Journal of Limnology Vol. 5 No. 2 (2024): Indonesian Journal of Limnology
Publisher : Indonesian Society of Limnology

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.51264/inajl.v5i2.78

Abstract

This study focuses on assessing the coastal conditions in Jambi Province both physicochemical and biological parameters. This combination of assessments previously still had limited understanding. Retrieval of physical parameter data using a multi-parameter water quality analyzer, chemical data using the APHA method and spectrophotometer, and chlorophyll-a data using the Copernicus Marine Environment Monitoring Service (CMEMS). The results, with adjustments to national quality standards and pollution index measurements, showed that the five research stations on the east coast of Jambi experienced light to moderate pollution with a score range of 1.252-5.831. Pollution is in the form of nutrients, especially nitrate. However, the trophic index of the coast is classified as oligotrophic, which ranges between 0.689278 - 0.7599 mg/m3. Otherwise, the high nutrient values are TOM and TN, which have a significant correlation, besides the correlation with DO and pH. Measurements of TN and TP in the water column and sediment have also been carried out, where the water column TN concentration is about 5 times higher than the sediment TN and the water column TP concentration is 7 times lower than the sediment TP. The results of this study will contribute to a better understanding of coastal ecosystem health and its significance for the management of the coastal environment in Jambi as a fisheries catchment area.
MANAGEMENT OF ENUCLEATION SURGERY IN MAINE COON CAT: Manajemen Operasi Enukleasi pada Kucing Maine Coon Syarifuddin, Ahmad; Damhuri, Dedi; Safitri, Jessica Anggun; Wibowo, Sarwo Edy
VITEK : Bidang Kedokteran Hewan Vol. 14 No. 2 (2024): VITEK-Bidang Kedokteran Hewan
Publisher : Fakultas Kedokteran Hewan Universitas Wijaya Kusuma Surabaya

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.30742/jv.v14i2.309

Abstract

Enucleation is a procedure for removing the eye in cats due to pathological conditions that cannot be treated with medical therapy, such as uncontrolled glaucoma or intraocular tumors. Prolapse of the bulbus oculi in cats is generally caused by glaucoma (increased intraocular pressure), bacterial or viral infections, trauma from being hit by a vehicle, scratches or fights with other animals, and eye tumors. The subject of this case was a male cat named Chiko, approximately 1 year old, weighing 2.5 kg, who was brought to the She Wee Veterinary Clinic in Palembang with the complaint of a protruding eye. Based on the anamnesis, physical examination, and clinical symptoms, Chiko was diagnosed with bulbus oculi prolapse and underwent medical treatment in the form of an enucleation surgery. The treatment administered included antibiotics, vitamins, analgesics, and ointments. The use of an Elizabethan collar was also recommended to prevent the wound from being scratched. Recovery showed good wound healing within approximately 7 days without serious complications. It was concluded that the enucleation procedure performed on Chiko, using the transpalpebral technique, had a fausta prognosis. Keywords: Prolapse, Bulbus Oculi, Enucleation, Eye and Cat.