Molekul: Jurnal Ilmiah Kimia
The MOLEKUL is dedicated to fostering advancements in all branches of chemistry and its diverse sub-disciplines. It aims to publish high-quality research encompassing a wide range of topics, including but not limited to Pharmaceutical Chemistry, Biological Activities of Synthetic Drugs, Environmental Chemistry, Biochemistry, Polymer Chemistry, Petroleum Chemistry, and Agricultural Chemistry. By providing a platform for rigorous scientific inquiry and dissemination of knowledge, the journal strives to contribute to the understanding, innovation, and practical applications of chemistry in various fields. We encourage submissions that explore new methodologies, elucidate fundamental principles, address pressing challenges, and demonstrate the potential for real-world impact. Our journal welcomes original research articles, reviews, and perspectives from researchers, scholars, and professionals across the global scientific community, promoting interdisciplinary collaboration and the advancement of chemical sciences. The scope of this journal encompasses a wide range of topics within the field of chemistry, with a particular focus on advancing knowledge and innovation in the following areas: 1. Theoretical Chemistry and Environmental Chemistry: This includes theoretical studies, computational modeling, and experimental investigations related to chemical reactivity, molecular structures, spectroscopy, and the environmental fate and impact of chemicals. 2. Materials Synthesis for Energy and Environmental Applications: The journal welcomes research on the synthesis, characterization, and application of materials for energy storage, catalysis, solar energy conversion, pollution mitigation, and sustainable environmental technologies. 3. Isolation, Purification, and Modification of Biomolecules: Manuscripts addressing the isolation, purification, and modification of biomolecules, such as proteins, nucleic acids, carbohydrates, and lipids, along with their applications in areas such as biotechnology, drug discovery, and diagnostics, are of particular interest. 4. Fabrication, Development, and Validation of Analytical Methods: The journal encourages submissions focusing on the development and optimization of analytical techniques, including chromatography, spectroscopy, electrochemistry, and mass spectrometry. Topics may include method validation, sample preparation, quality control, and applications in diverse fields.
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<![CDATA[Antimalarial Activity of Mangrove Plants and Possible Mechanisms of Action: A Scoping Review ]]>
<![CDATA[Rizki, Andita Fitri Mutiara]]>;
<![CDATA[Azmi, Wihda Aisarul]]>;
<![CDATA[Muhaimin, Muhaimin]]>;
<![CDATA[Louisa, Melva]]>;
<![CDATA[Artika, I Made]]>;
<![CDATA[Siregar, Josephine Elizabeth]]>
<![CDATA[ Molekul Vol 19 No 1 (2024) ]]>
Publisher : <![CDATA[Universitas Jenderal Soedirman ]]>
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DOI: 10.20884/1.jm.2024.19.1.9236
<![CDATA[Malaria is one of life threatening-infectious diseases with high mortality rate in African regions. Malaria is also one of public health problem in most of Southeast Asia (SEA) regions. This disease is caused by a Apicomplexan parasite; Plasmodium sp., which can be transmitted from humans to humans via Anopheles sp. To date, the need of a new antimalarial drug is still high, due to the rapid increase of drug resistance. Natural-derived drug candidates are still being used by researchers to develop new antimalarials. One of the natural resources which could potentially be a source of antimalarial agents are mangrove plants. Traditionally, mangrove plants have been employed as antibacterial, antioxidant, anticancer, and antidiabetic. Therefore, we conducted a scoping review to identify, evaluate and summarize findings of newly found antimalarial drug activity from mangrove plants and elaborate the possible mechanism of actions in killing the parasites. From several databases, we found six mangrove species which have been suggested as potential antimalarial sources. Various phytochemical compounds in extracts made from those plants were revealed to exert antimalarial activity. These include alkaloids, flavonoids, tannins, phenols, terpenoids, saponins, coumarins, triterpenes, glycosides, and anthraquinones which were indicated to have antimalarial activity against Plasmodium. From eight studies investigating mangrove plant extracts, no toxic effects were shown. Therefore, considering the available evidences, we suggested that mangrove plants can be used as a source for the discovery of antimalarial compounds with promising activities against Plasmodium sp. However, deeper understanding on the exact mechanisms of their actions still requires further elucidation. Keywords: Antimalaria, Anthraquinone, Mangrove, Plasmodium sp., Protozoa]]>
<![CDATA[The Sesquiterpenoids from the Stem Bark of Dysoxylum excelsum and Their Cytotoxic Activities against HeLa Cancer Cell Lines ]]>
<![CDATA[Supratman, Unang]]>;
<![CDATA[Kautsari, Arsi]]>;
<![CDATA[Naini, Al Arofatus]]>;
<![CDATA[Riyadi, Sandra Amalia]]>;
<![CDATA[Mayanti, Tri]]>;
<![CDATA[Harizon, Harizon]]>;
<![CDATA[Fajriah, Sofa]]>
<![CDATA[ Molekul Vol 19 No 1 (2024) ]]>
Publisher : <![CDATA[Universitas Jenderal Soedirman ]]>
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DOI: 10.20884/1.jm.2024.19.1.9406
<![CDATA[Sesquiterpenoids belong to a group of terpenoid compounds with interesting structures that are abundant in natural products especially in higher plants. Sesquiterpenoids have a wide variety of bioactivities with great potential cytotoxic activity. The species Dysoxylum excelsum belongs to the Meliaceae family known as higher plant, but only a few sesquiterpenoids have been reported particularly for their cytotoxic activity. Therefore, this research aims to isolate and elucidate the sesquiterpenoids structure from D. excelsum stem bark and examines their cytotoxicity against HeLa cervical cancer cells. Through various column chromatography separations, four known sesquiterpenes namely β-caryophyllene oxide (1), caryophyllenol II (2), humulene dioxide A (3), and guai-6-en-10β-ol (4) were acquired from the n-hexane extract. Compounds 1-4 were isolated for the first time from D. excelsum species. The sesquiterpenoid structures were elucidated according to Nuclear Magnetic Resonance, Infrared, and HR-TOF-MS analysis. The cytotoxicity compounds 1-4 was determined against HeLa cervical cancer cells by examination with the PrestoBlue method and compound 3 exhibited the most potent cytotoxicity with an IC50 value of 160.74 µM. Keywords: cytotoxic activity, Dysoxylum excelsum, HeLa, Meliaceae, sesquiterpenoid.]]>
<![CDATA[Chitinase Enzyme-Producing Endophytic Bacterias From the Roots of the Plant Gembolo (Dioscorea bulbifera): Isolation, Characterization and its Potential as an Antifungal Agent ]]>
<![CDATA[Yunita, Vivi Alfi]]>;
<![CDATA[Natsir, Hasnah]]>;
<![CDATA[Ahmad, Ahyar]]>;
<![CDATA[Baharuddin, Maswati]]>
<![CDATA[ Molekul Vol 19 No 1 (2024) ]]>
Publisher : <![CDATA[Universitas Jenderal Soedirman ]]>
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DOI: 10.20884/1.jm.2024.19.1.9422
<![CDATA[Chitinase is an enzyme of the chitinolytic group that has many roles in agriculture, especially as an antifungal, because chitin is one of the constituent components of the fungal cell wall. This study aimed to isolate and identify endophytic bacteria from gembolo (Dioscorea bulbifera) roots and to characterize the chitinase enzyme from these endophytic bacteria to be used as an antifungal. Isolation and identification of gembolo plant root endophytic bacteria using PCR method of 16S rRNA gene amplification and sequencing. Characterization of the chitinase enzyme produced includes determining of optimum pH, temperature, and substrate UV-Vis spectrophotometer. Antagonistic test of the chitinase enzyme and endophytic bacterial isolates (isolate K4) Fusarium oxysporum. The results showed that bacterial isolate K4 had with chitinolytic index of 2.45 mm. Electrophoresis results with PCR 16s rRNA gene; the length of the amplified fragment is the position of 1300 bp. By doing the BLAST process in GenBank, the bacterial isolate has 97.93% similarity with Enterobacter cloacae. Then, this endophytic bacteria is called Enterobacter cloacae K4-G. This bacterium produced chitinase enzyme reaching maximum chitinase activity at the 38 hours with an activity of 0.0312 U/mL. The chitinase characterization results of E. cloacae K4-G showed that the optimum conditions were reached at at pH 6, temperature 45 ᵒC, and 2.5% substrate with a chitinase activity value of 0.2467 U/mL. Chitinase enzyme and bacteria Enterobacter cloacae K4-G can inhibit the growth of the fungus Fusarium oxysporum. Therefore, Chitinase from Enterobacter cloacae K4-G can be used as an antifungal pathogen in plants.]]>
<![CDATA[Adsorption of Methylene Blue using the Biosorbent of Coconut Fiber Activated by Nitric Acid ]]>
<![CDATA[Baunsele, Anselmus Boy]]>;
<![CDATA[Kopon, Aloisius Masan]]>;
<![CDATA[Boelan, Erly Grizca]]>;
<![CDATA[Leba, Maria A. U.]]>;
<![CDATA[Komisia, Faderina]]>;
<![CDATA[Tukan, Maria B.]]>;
<![CDATA[Taek, Maximus M.]]>;
<![CDATA[Tukan, Gerardus D.]]>;
<![CDATA[Missa, Hildegardis]]>;
<![CDATA[Siswanta, Dwi]]>;
<![CDATA[Naat, Johnson N.]]>;
<![CDATA[Rahayu, Rahayu]]>
<![CDATA[ Molekul Vol 19 No 1 (2024) ]]>
Publisher : <![CDATA[Universitas Jenderal Soedirman ]]>
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DOI: 10.20884/1.jm.2024.19.1.9443
<![CDATA[The textile industry in the world keeps increasing, but it harms environmental pollution caused by textile dye waste. Synthetic dyes contain carcinogenic and mutagenic ingredients that can demage the environment and aquatic biota. The alternative to handling dye pollution with a low-cost method is adsorption using nitric acid-activated coconut fiber. Coconut fiber was an abundant agricultural waste and economical, and it had an active site that contained many compounds such as cellulose, lignin, pyroligneous acid, and tannin molecules. This study used the UV-Vis Spectrophotometer analysis method to determine the effect of pH, contact time, and coconut fiber on the adsorption capacity of methylene blue. The result showed that the optimal conditions for adsorption were a pH of 5, a contact time of 75 minutes, and a percentage adsorption of the variation of contact time of 99.628%. The adsorption study was according to a pseudo-second-order reaction with a constant reaction rate of 0.050 g mg-1 minute-1. The maximum adsorption capacity was 2 mg g-1, with the percentage of methylene blue adsorbed at 99.84%. Adsorption occurs chemically with an energy of 35.4 kJ mol-1, so it can be determined that it occurs with a monolayer mechanism.]]>
<![CDATA[Silver-and-Sulphur-Codoped Fe3O4/TiO2 as a Magnetically Separable Photocatalyst for Methylene Blue Degradation under Visible Light ]]>
<![CDATA[Kunarti, Eko Sri]]>;
<![CDATA[Agustiningsih, Dewi]]>;
<![CDATA[Pambudi, Fajar Inggit]]>;
<![CDATA[Rusli, Stefen]]>;
<![CDATA[Rusdiarso, Bambang]]>
<![CDATA[ Molekul Vol 19 No 1 (2024) ]]>
Publisher : <![CDATA[Universitas Jenderal Soedirman ]]>
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DOI: 10.20884/1.jm.2024.19.1.9508
<![CDATA[This research aimed to investigate how the addition of silver and sulphur dopants modified the TiO2 photocatalyst to enhance its responsiveness to visible light and improve its photocatalytic activity for methylene blue degradation. In addition, Fe3O4 was also added as a core to add magnetic properties to the photocatalyst material. The Fe3O4/TiO2-Ag/S materials were prepared using FeCl3.6H2O and FeSO4.7H2O as the magnetite precursors, titanium tetraisopropoxide (TTIP) as the TiO2 precursor, while AgNO3 and CH4N2S were used as the sources for silver and sulphur dopants, respectively. The synthesized materials were next characterized using FT-IR, XRD, UV-Vis spectrophotometer, SEM-EDX, TEM, and VSM. The activity of the photocatalyst was then assessed through methylene blue degradation in a closed reactor involving various contained Ag:S ratios and reusability examination. The evaluation of photocatalytic degradation results was performed using UV-Vis spectrophotometry. Afterwards, the research findings indicate that the Fe3O4/TiO2-Ag/S was successfully synthesized and exhibited magnetic properties with a saturation magnetization value of 5.33 emu/g. The highest photocatalytic activity (98.21%) was observed in Fe3O4/TiO2-Ag/S (1:1) with a band gap energy value of 2.64 eV under visible light exposure at pH 10, 120 min, 10 mg mass of the photocatalyst, and methylene blue concentration of 5 mgL-1. Furthermore, the Fe3O4/TiO2-Ag/S photocatalyst was known to perform good stability through four reuse cycles.]]>
<![CDATA[Production of High Protein MOCAF (Modified Cassava Flour) Using Papain and Lactic Acid Bacteria ]]>
<![CDATA[Afifah, DIni Nur]]>;
<![CDATA[Ma'ruf, Anwar]]>;
<![CDATA[Putri, Regita Nanda]]>;
<![CDATA[Santosa, Arif Prashadi]]>;
<![CDATA[Hamad, Alwani]]>
<![CDATA[ Molekul Vol 19 No 1 (2024) ]]>
Publisher : <![CDATA[Universitas Jenderal Soedirman ]]>
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DOI: 10.20884/1.jm.2024.19.1.9712
<![CDATA[Wheat is one of Indonesia's primary sources of carbohydrates. However, the need for wheat still depends on imports. So, developing local flour based on Indonesia's natural resources is necessary. One source of carbohydrates easily found in Indonesia is cassava (Manihot esculenta crantz). Although there are many in Indonesia, the diversification of cassava-based products is still limited. In this research, MOCAF flour was developed and produced by fermenting cassava tubers with lactic acid bacteria. The enzymatic activity during the MOCAF (Modified Cassava Flour) production process is believed to change the physicochemical properties of cassava so that MOCAF products have characteristics similar to wheat flour and are expected to meet the gap between the demand and availability of flour. Even though it can potentially substitute wheat, MOCAF flour only has about 1% protein content, influencing dough rheology. According to the problem, a process modification was done by adding the enzyme papain (PAP) as a support enzyme to improve the performance of lactic acid bacteria (LAB). In order to study the effect of the papain enzyme, variations were made on the ratio of lactic acid starter: papain enzyme (LAB: PAP) and fermentation time. The ratio of (LAB: PAP) was varied to 40:1, 40:3, 40:5, 40:7, and 40:9, while the fermentation period was varied to 24, 48, 72, 96, and 120 hours. The fermentation was conducted by using cassava varieties of Singkur aerobically. The primary starter contained Lactobacillus, sp, developed by PT. Rumah Mocaf Indonesia and the papain enzyme used have an activity of 100,000 U/g. Data analysis showed that the addition of papain enzyme doses with a ratio to the lactic acid starter of 40:7 was able to produce MOCAF with the best characteristics: protein content, starch content, and swelling power of 3.72%, 9.99%, 16.00%, respectively. The data trend of research also showed that the number of papain enzymes only significantly affects starch content and swelling power. On the other hand, fermentation time has a significant effect on these three characteristics (protein, starch, swelling power).]]>
<![CDATA[Direct Extraction and Conversion of Microalgal Lipid from Chlorella vulgaris to Biodiesel Through In Situ Process Assisted by Sonication ]]>
<![CDATA[Wulandari, Melysa]]>;
<![CDATA[Hadi, Sofijan]]>;
<![CDATA[Purkan, Purkan]]>;
<![CDATA[Sumarsih, Sri]]>;
<![CDATA[Abdulloh, Abdulloh]]>;
<![CDATA[Wahyuni, Dwi Kusuma]]>;
<![CDATA[Piluharto, Bambang]]>
<![CDATA[ Molekul Vol 19 No 1 (2024) ]]>
Publisher : <![CDATA[Universitas Jenderal Soedirman ]]>
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DOI: 10.20884/1.jm.2024.19.1.10042
<![CDATA[Direct extraction and conversion of microalgal lipid to biodiesel in one step process is developed to initiate an efficiently method in the biofuel production. The method that called as in-situ process had been applied in the biodiesel production from microalgae Chlorella vulgaris lipid by involving of sonication assisting. Various parameters that affect the in-situ transesterification were investigated to find the optimum conditions including power of sonication, co-solvent use, and biomass amount. The experiment was performed by acidic catalyst The use of sonication in 25kHz/270W yielded the highest biodiesel product. The apply of co-solvent n-hexane significantly increased the yield biodiesel rather than no co-solvent. The biodiesel yield of 10.39 % obtained when the process was accompanied by the n-hexane.as co-solvent with increasing level as 47% rather than without co-solvent. The in situ process in the ratio biomass - methanol 3:50 that assisted by sonication for 60 mins produced the highest biodiesel, which was 20,31 % w/w. The yield was higher than assisting with reflux or combination of reflux-sonication. The component of biodiesel yielded in the process consisting of 7,10,13-hexadecatrienoic methyl ester; pentadecanoic acid, 14-methyl-methyl ester; 9,12,15-octadecatrienoic acid-methyl ester; and eicosanoic acid-methyl ester. Joining of reflux-sonication exhibited a low biodiesel product. Disadvantage method from the combination may inhibit on lipid extraction or FAME transformation, the exact cause needs to be looked for in the future. Keywords : Biodiesel, in-situ transesterification, microalgae Chlorella vulgaris, sonication]]>
<![CDATA[Evaluating Porins OmpK35 and OmpK36 mRNA Expression in Ciprofloxacin-Resistant Klebsiella pneumoniae ]]>
<![CDATA[Sulistiyawati, Indah]]>;
<![CDATA[Wahyono, Daniel Joko]]>;
<![CDATA[Siswandari, Wahyu]]>
<![CDATA[ Molekul Vol 19 No 1 (2024) ]]>
Publisher : <![CDATA[Universitas Jenderal Soedirman ]]>
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DOI: 10.20884/1.jm.2024.19.1.10134
<![CDATA[Porin messenger RNA (mRNA) expression significantly influences porin permeability and reduces antibiotic penetration. Klebsiella pneumoniae has developed resistance to several antibiotics. Decreased expression levels of OmpK35 and OmpK36 porins result in changes in the porin profile and even functional loss of porins. This research aimed to analyze the relative expression of the outer membrane porins, OmpK35 and OmpK36. The research methodology involved MIC assays and quantification of OmpK35 and OmpK36 mRNA using RT-qPCR. The relative expression of OmpK35 and OmpK36 in clinical isolate K. pneumoniae is 0.8925 and 0.5877, respectively. The porin permeability of OmpK35/K36 mRNA positively correlated with the MIC values of OmpK35 (p-value = 0.029) and OmpK36 (p-value = 0.016), respectively. Keywords: Ciprofloxacin, Klebsiella pneumoniae, OmpK35/K36, porin permeability]]>
<![CDATA[The Use of Molasses in Producing Bioethanol Catalyzed by Candida tropicalis (Isolated from Cocos nucifera. L) Immobilized MnFe2O4 Coated-Chitosan ]]>
<![CDATA[Kasmiarti, Getari]]>;
<![CDATA[Hermansyah, Hermansyah]]>;
<![CDATA[Novia, Novia]]>;
<![CDATA[Hariani, Poedji Loekitowati]]>
<![CDATA[ Molekul Vol 19 No 1 (2024) ]]>
Publisher : <![CDATA[Universitas Jenderal Soedirman ]]>
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DOI: 10.20884/1.jm.2024.19.1.10765
<![CDATA[Bioethanol is a sustainable fuel product to be an alternative energy source. Therefore, the study aims to observe and analyze the effect of MnFe2O4 coated-chitosan in increasing bioethanol production. This bioethanol was produced from molasses with a high total sugar content of up to 50% with Candida tropicalis as the microorganism. Fermentation is divided into two parts, namely using free C. tropicalis and C. tropicalis immobilized MnFe2O4 coated-chitosan. There was electrostatic interaction between MnFe2O4 and chitosan in 578 cm-1 and 659 cm-1 of FTIR, cubic spinel pattern in XRD, and SEM surface image of C. tropicalis immobilized MnFe2O4 coated-chitosan interaction. These characterization results show very good properties as a biocatalyst. The highest concentration was produced by fermentation using C. tropicalis immobilized MnFe2O4 coated-chitosan about 4.35% with residual sugar of 8.46 g/L. In summary C. tropicalis immobilized MnFe2O4 coated-chitosan have the potential to improve bioethanol products.]]>
<![CDATA[Approximate Solution to the Schrödinger Equation of Exotic Doubly Muonic Helium-like Systems Using Hydrogenic-based Matrix Mechanics ]]>
<![CDATA[Pingak, Redi Kristian]]>;
<![CDATA[Jacob, Johanes Eliaser]]>;
<![CDATA[Bernandus, Bernandus]]>;
<![CDATA[Johannes, Albert Zicko]]>;
<![CDATA[Setiawan, Ely]]>
<![CDATA[ Molekul Vol 19 No 1 (2024) ]]>
Publisher : <![CDATA[Universitas Jenderal Soedirman ]]>
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DOI: 10.20884/1.jm.2024.19.1.11224
<![CDATA[The approximate solution to the Schrödinger equation of exotic doubly muonic helium-like systems has been obtained using a simple matrix method based on hydrogenic s-states. Each system considered consists of a positively charged nucleus surrounded by 2 negatively charged muons XZ+μ-μ- (2 Z 36). The present work aims to obtain approximate ground-state energies of the systems and to decompose the energies in terms of the basis states used. Here, the wave function was expressed as a linear combination of 15 eigenfunctions, each written as the product of two hydrogenic s-states. The elements of the Hamiltonian matrix were calculated and finally, the energy eigenvalue equation was numerically solved to obtain the ground-state energies of the systems with their corresponding eigenvectors. From the results, ground-state energies of all systems were in agreement with others from the literature, with percentage differences between 0.03% and 2.05%. The analysis of the probability amplitudes from the eigenvectors showed that the 1s1s state made the largest contribution to the ground state energies of the systems, approaching 90.99%, 96.98% and 98.54% for He2+μ-μ- , Li3+μ-μ- , and Be4+μ-μ- , respectively. Keywords: Doubly muonic helium-like systems, ground state energy, hydrogenic basis states, matrix mechanics, Schrödinger equation]]>
