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All Journal HAYATI Journal of Biosciences Jurnal Agronomi Indonesia (Indonesian Journal of Agronomy) Buletin Agrohorti Jurnal Ilmu Pertanian Indonesia Jurnal Hortikultura Indonesia (JHI) Jurnal Silvikultur Tropika (JST) Agrotrop : Journal on Agriculture Science Bionatura Zuriat Jurnal Natur Indonesia Atom Indonesia Journal Jurnal Ilmiah Aplikasi Isotop Radiasi Jurnal Agro Teknologi Tropika Jurnal Ilmu Komputer dan Agri-Informatika Jurnal Hortikultura Jurnal AgroBiogen Jurnal Penelitian Tanaman Industri Buletin Penelitian Tanaman Rempah dan Obat Pelita Perkebunan Jurnal Agroekoteknologi Jurnal Agro Jurnal Penelitian Karet Tropical Animal Science Journal Majalah Ilmiah Biologi BIOSFERA: A Scientific Journal Journal of Tropical Crop Science JURNAL BUDIDAYA PERTANIAN Jurnal Agrotek Lestari Jurnal Penelitian Tanaman Industri (Littri) Buletin Penelitian Tanaman Rempah dan Obat Warta Perkaretan Jurnal Sains Terapan : Wahana Informasi dan Alih Teknologi Pertanian Jurnal Natural
Desta Wirnas
Departemen Agronomi Dan Hortikultura, Fakultas Pertanian, Institut Pertanian Bogor (IPB University), Jl. Meranti, Kampus IPB Darmaga, Bogor 16680, Indonesia
Agriculture, Biological Sciences & Forestry Astronomy Biochemistry, Genetics & Molecular Biology Chemical Engineering, Chemistry & Bioengineering Chemistry Computer Science & IT Decision Sciences, Operations Research & Management Earth & Planetary Sciences Economics, Econometrics & Finance Education Energy Environmental Science Immunology & microbiology Industrial & Manufacturing Engineering Materials Science & Nanotechnology Neuroscience Physics Social Sciences Veterinary

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Journal : Jurnal AgroBiogen

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Molecular Analysis and Phenotypic Performances of BC3F2 Upland Rice Lines Containing Alt and Pup1 Loci Mizan, Muhammad Rauful; Wirnas, Desta; Tasliah, nFN; Hidayatun, Nurul; Prasetiyono, Joko
Jurnal AgroBiogen Vol 15, No 2 (2019): December
Publisher : Balai Besar Penelitian dan Pengembangan Bioteknologi dan Sumber Daya Genetik Pertanian

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.21082/jbio.v15n2.2019.p83-92

Abstract

The challenges in upland rice cultivation are phosphorous (P) deficiency and aluminum (Al) toxicity, each controlled by Pup1 and Alt loci, respectively. Pyramiding the two genes into Indonesian rice varieties were previously done through Marker-Assisted Backcrossing method to obtain BC3F2 populations. The aims of this study were to analyze the BC3F2 upland rice lines containing the Alt and Pup1 loci molecularly (foreground and background analyses) and to test their phenotypic performances. Genetic materials tested included Dupa variety (donor of Alt) and three improved Indonesian genotypes (Dodokan-Pup1, Situ Bagendit-Pup1, and Batur-Pup1) as recurrent parents, Kasalath (donor of Pup1), and 300 BC3F2 lines from Dodokan-Pup1+Alt, Situ Bagendit-Pup1+Alt, and Batur-Pup1+Alt, respectively. The rice genotypes were selected individually using modified Yoshida nutrient solution, followed by foreground and background analyses. 150 out of 300 seedlings were selected and maintained until harvest in the greenhouse. Foreground analysis using markers (RM1361, RM12031, and Kas46-2) and tiller number performances resulted in 18 plants from BC3F2 Dodokan-Pup1+Alt, 30 plants from BC3F2 Situ Bagendit-Pup1+Alt, and 25 plants from BC3F2 Batur-Pup1+Alt still carrying Alt and Pup1 loci. Background analysis using molecular markers showed that the best individual lines of BC3F2 were number 56 for BC3F2 Dodokan-Pup1+Alt, number 32 or 70 for BC3F2 Situ Bagendit-Pup1+Alt, and number 20 for BC3F2 Batur-Pup1+Alt. The selected lines having both both Alt and Pup1 loci in homozygote condition with highest number of tiller per plant which are useful genetic materials for developing upland rice variety tolerance to low P and Al toxicity.
Co-Authors ,, Mawaddah . SUDARSONO . SUWARSO Achmad . Adinda Wuriandani Adinda Wuriandani Agung Wahyu Susilo Agung Wahyu Susilo Agung Wahyu Susilo Ahmad Ansori Mattjik Ahmad Ansori Mattjik AHMAD JUNAEDI Aidi Noor Akhmadi, Gerland Alaydi, Nafian Amris Makmur Arvita Netti Sihaloho, Arvita Netti Atika Bakti Sari Azri Kusuma Dewi Bambang Sapta Purwoko Buang Abdullah Dedek hanafiah Dewi Andriani Diana Sofia Hanafiah Didy Sopandie Edi Santosa Edison Jambormias EDIZON JAMBORMIAS Eka Bobby Febrianto, Eka Bobby Eni Widajati Faqih Udin Faradila Median Rini Firman Ardiansyah Gopar, R. A. HAJRIAL ASWIDINNOOR Halimah Tus Sa'diah Halimatus Syahdia Hasibuan HESTI MAULIDA Hidayatun, Nurul Human, dan Soeranto I. Prihantoro, I. Imam Widodo Ishmatalhaq, Zannuba Iskandar Lubis Isnaini, Isnaini Iswari S. Dewi Iswari Saraswati Dewi Jaisyurahman, Usamah Jasmi Jekki Irawan Junaedi, dan Ahmad Karlin Agustina Khairil Anwar L. Abdullah Lela Marlenasari M A Chozin Mahpuzah, Marfiatun Manalu, Victor Manotar Pademan Mardhiyyah, Rodhiyatan Marlenasari, Lela Maryono, Marina Yuniawati Mattjik, Ahmad A Maulida, Hesti Mayang Sari Memen Surahman Mizan, Muhammad Rauful Mizan, Muhammad Rauful Momongan, Jorex Daniel Muhamad Syukur Muhammad Arif Yudiarto Munarti Munif Ghulamahdi Nindita, Anggi Nita Kartina, Nita Nofika Senjaya NUR KHOLISOH NURHAJATI AA MATTJIK NURHAJATI MATTJIK Nurheni Wijayanto OTIH ROSTIANA P. D. M. H. Karti Patty, Jacob R Pipit Werdhiwati Prasetiyono, dan Joko Prasetiyono, Joko Pratama, Muhammad Antony Jefri Purbokurniawan . Putra, B. Putri Andini Mandasari Ratih Irma Khairani Saragih Rini, Erin Puspita Rini, Faradila Median S. Human Saniaty, Arina Saragih, Ery Leonardo Saragih, Ratih Irma Khairani Sayurandi Sayurandi Sayurandi Sayurandi Sayurandi Sayurandi Sayurandi Sayurandi, Sayurandi Saļ¬tri, Heni Sekar Woelan Sekar Woelan Sekar Woelan Sekar Woelan SESANTI BASUKI SESANTI BASUKI Sherly Rahayu Siti Marwiyah Siti Marwiyah Sobir Sobir Sobir Sobir Sobir Sobir Soeranto Human SRI WARDANI Sudarsono SUDARSONO SUDARSONO Sudarsono, dan Sudirman Yahya Sudirman Yahya Sudirman Yahya Sudirman Yahya - Sumiati, dan Sungkono Sungkono Sunyoto Sunyoto Surjono H Sutjahjo, Surjono H Surjono Hadi Sutjahjo Suwarno, Punjung Medaraji SUWARSO SUWARSO Tasliah, nFN Tias Arlianti Tri Budiyanti Trikoesoemaningtyas Trikoesoemaningtyas Trikoesoemaningtyas Trikosoemaningtyas Trikosoemaningtyas Trikosoemaningtyas Usamah Jaisyurahman W. Puspitasari Wage Ratna Rohaeni WAGE RATNA ROHAENI Wardhani, Azhahara Putri Kusuma Wibawa, Rentang Fajar Cakra Wuriandani, Adinda Yani Nurhadryani Yudiwanti Wahyu E. Kusumo Yulidar Yulidar