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Journal : HAYATI Journal of Biosciences

COI Gene Analysis of Asian Horseshoe Crab in Banyuasin Estuarine Waters, Sumatra, Indonesia Fatimah Fatimah; Apon Zaenal Mustopa; Fauziyah; Anna Ida Sunaryo Purwiyanto; Langgeng Priyanto; Nita Puspita Sari; Fitri Agustriani; Rozirwan Rozirwan
HAYATI Journal of Biosciences Vol. 30 No. 3 (2023): May 2023
Publisher : Bogor Agricultural University, Indonesia

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.4308/hjb.30.3.567-575

Abstract

There is limited study on DNA barcoding of horseshoe crabs in South Sumatra, Indonesia. The present study was the first to record horseshoe crabs' COI DNA barcoding in three localities of Banyasin estuarine waters. The nucleotide composition was in a strong adenine thymine bias (AT = 63.90%) with high haplotypic diversity (Hd = 0.858) relative to low nucleotide diversity (π = 0.0534). A total of 16 haplotypes were recorded, of which two were in Carat Cape, 4 in Makati Jaya, and 12 in the Banyuasin river estuary (BRE), and Hap 1 was a dominant type (62.5%). The population differentiation (FST) value was varied, and only in the comparison of BRE-Carat Cape was significant (FST = 0.637), while the gene flow (Nm) value in Makati Jaya-BRE was high (6.563). The neutrality test, Tajima's D (0.4142), and Fu's Fs values were negative (-0.492), suggesting these populations have experienced a current bottleneck or multiplication. Analysis of molecular variation (AMOVA) suggested that 68% was distributed within populations. The haplotype network, PCoA, and phylogenetic of COI DNA sequences clustered in three groups correspond to Carcinoscorpius rotundicauda, Tachypleus gigas, and Tachypleus tridentatus. This finding is a matter of concern for managing and conserving horseshoe crab species in Banyuasin estuarine waters.
Co-Authors . Chaidir ., Renaldi Ade Siswanto Adi Purwandana Akhmad Tri Prasetyo Alfiansyah, Yustian Rovi Ali Mahmudi Alimin Alimin Amanda Astri Pratiwi Febrianti Ananta, Dio Alif Andi Agussalim, Andi Anggraini, Rifka Rimbi Ani Haryati, Ani Aning Puji Saputri Anna Heirina Anna Ida Sunaryo Purwiyanto Anna Ida Sunaryo Purwiyanto Anna Ida Sunaryo Purwiyanto Anna Ida Sunaryo Purwiyanto Anna IS Purwiyanto Apon Zaenal Mustopa Arief Rachman Asshidiq, Hasbi Nur Ayu Eka Putri, Wike Bakri Barus, Beta Susanto Chaidir Chaidir Che Abd Rahim Mohamed Daratil Khoiri Mukhlis Delima A. G. Situmorang Delta, Muhammad Dian Anggun Lestari Dianysah, Gusti Dietriech Geoffrey Bengen Dimas Arie Pratama Elisa Wildayana Elisa Wildayana Fatimah Fatimah Fatmalina Febry Fauziyah FAUZIYAH Fauziyah Fauziyah Fauziyah Fauziyah Fauziyah Fauziyah Fauziyah Fery Pratama Firdaus, Mochamad Ramdhan Fitrah Amelia Fitrani Mirna Fitri Agustriani Fitri Agustriani Gaby Ananda Dejulien Gires Usup Gusri, Ariqoh Athallah Gusti Diansyah Gusti Diansyah Hanif Budi Prayitno Hartoni Hartoni Hartoni Hary Widjajanti Hasbi Nur Asshidiq Hefni Effendi Heron Surbakti Herpandi . Hilmaturosyidah, Hilmaturosyidah Iskhaq Iskandar Ismarti, Ismarti Isnaini Isnaini Isnaini . Judistira Siddik Khotimah, Nadila Nur Langgeng Priyanto Lestari, Ning Intan M. Hendri Mei Ida Susanti Meiyerani, Jeni Melki Melki Melki Melki Melki Melki Melki Mohamed, Che Abd Rahim Muhamad Nur Muhammad Delta Muhammad Hendri Muhammad Hendri Muhammad Hendri Muhammad Hendri Muhammad Hendri Muhammad Hendri Muhtadi Muhtadi Muhtadi Muhtadi Mukhlis, Daratil Khoiri Nadila Nur Khotimah Nadila Nur Khotimah Nadila Nur Khotimah Nadya Rahmania, Nadya Neviaty P. Zamani NEVIATY PUTRI ZAMANI Neza Rahayu Palapa Ningsih, Ellis Nurjuliasti Nita Puspita Sari Nuril Azhar Nurlisa Hidayati Nurul Fitriya Nurwijayanti Oksto Ridho Sianturi Purwiyanto, Anna IS Rahmad Purnama Rahmad Purnama, Rahmad Ramses Ramses Ramses Redho Yoga Nugroho Reftika Ramona Putri Renaldi . restu juniah, restu Rezi Apri Rezi Apri Ridhah Taqwa, Ridhah Rifka Rimbi Anggraini Rio Nopandri Rio Nopandri Riris Aryawati Risfidian Mohadi Riswani Riswani Riswani Riswani Rizky Okta Vianti Rizky Sepferizal Rudi Hartono Sarno Sarno Sepferizal, Rizky Sitorus, Natalia Clarisa Sri Rahayu Sugeha, Hagi Yulia Syamdhora, Riki T. Zia Ulqodry Tengku Zia Ulqodry Tengku Zia Ulqodry Tengku Zia Ulqodry Tika Gustiana Ulqodry, T Zia Vianti, Rizky Okta Wahyudi Wahyudi Wijayanti, Lady Ayu Sri Wike Ayu Eka Putri Wike Ayu Eka Putri Winarta, Yoga Yossy Fitria Yulianto Suteja Yundari, Yundari Yusni Ikhwan Siregar Zia Ulqodry, Tengku