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Fatmah Dhafir
Department Of Biology Education, Faculty Of Teacher Training And Education, Tadulako University, Palu, Sulawesi Tengah, Indonesia, 94148
Agriculture, Biological Sciences & Forestry Biochemistry, Genetics & Molecular Biology Chemical Engineering, Chemistry & Bioengineering Chemistry Civil Engineering, Building, Construction & Architecture Computer Science & IT Education Engineering Health Professions Immunology & microbiology Mathematics Physics Public Health Social Sciences Other

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Journal : BIOEDUSCIENCE

 1 
Struktur 3D Protein Struktural VP1 pada Enterovirus A71 Menggunakan Swiss-Model Suprianto; Made Budiarsa; Fatmah Dhafir
BIOEDUSCIENCE Vol 4 No 1 (2020): BIOEDUSCIENCE
Publisher : Universitas Muhammadiyah Prof. Dr. Hamka

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (642.404 KB) | DOI: 10.29405/j.bes/4137-474353

Abstract

Background: Protein struktural VP1 berperan sebagai pemain kunci dalam patogenesis, memiliki keunikan yang cukup menarik untuk dikaji dengan mempelajari sifat dan fungsi protein struktural VP1. Penelitian ini bertujuan untuk memprediksi struktur tiga dimensi protein VP1 pada EV-A71. Metode: Protein target diperoleh dari server UniProt dengan kode akses A0A097EV89 menggunakan template 4cey.1.A (PDB ID) dianalisis secara in silico melalui metode homologi menggunakan server SWISS-MODEL. Hasil: analisis penelitian menunjukkan protein target dan template memiliki identity 95,29 % dan tersusun dari 297 asam amino dengan nilai QMEAN -2,15. Protein struktural VP1 pada Ramachandran Plots memiliki struktur stabil, residu non-glisin pada daerah outlier hanya berkisar 0,34 % (A53 ALA) dengan Nilai rotamer outliers 1,61 %. Kesimpulan: Model struktur tiga dimensi protein yang diteliti memiliki struktur stabil dan informasi yang didapatkan berguna untuk penelitian lebih lanjut dalam pengembangan vaksin penyakit yang disebabkan oleh EV-A71.
Variasi Morfometrik Tetragonula laeviceps di Berbagai Habitat di Provinsi Sulawesi Tengah I Made Budiarsa; Fatmah Dhafir; Manap Trianto
BIOEDUSCIENCE Vol 6 No 2 (2022): BIOEDUSCIENCE
Publisher : Universitas Muhammadiyah Prof. Dr. Hamka

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (301.233 KB) | DOI: 10.22236/j.bes/625062

Abstract

Background: Habitat is a place for living things to grow and develop. Differences in habitat in an area can affect the size of an organism. This study aims to determine the morphometric variations of Tetragonula laeviceps found in urban and forest habitats in Central Sulawesi Province. Methods: This research was conducted with roaming technique. Morphometric characters observed were 35 characters of stingless bee and analyzed using Microsoft Excel software. Results: The results of this study indicated that the morphometric size variation of T. laeviceps found in forest habitats (3.58 mm) is greater than that of wild bee in urban habitats (3.05 mm). Conclusions: Different habitat characteristics can affect the morphometry variations of the bee, especially in T. laeviceps species. The bee's morphometry body size is greater than in the forest habitat, because in that habitat there are environmental temperatures and types of plant sources of nectar which are more supportive for bee life compared to urban habitats.
Struktur 3D Protein Struktural VP1 pada Enterovirus A71 Menggunakan Swiss-Model Suprianto Suprianto; Made Budiarsa; Fatmah Dhafir
BIOEDUSCIENCE Vol 4 No 1 (2020): BIOEDUSCIENCE
Publisher : Universitas Muhammadiyah Prof. Dr. Hamka

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.29405/j.bes/4137-474353

Abstract

Background: Protein struktural VP1 berperan sebagai pemain kunci dalam patogenesis, memiliki keunikan yang cukup menarik untuk dikaji dengan mempelajari sifat dan fungsi protein struktural VP1. Penelitian ini bertujuan untuk memprediksi struktur tiga dimensi protein VP1 pada EV-A71. Metode: Protein target diperoleh dari server UniProt dengan kode akses A0A097EV89 menggunakan template 4cey.1.A (PDB ID) dianalisis secara in silico melalui metode homologi menggunakan server SWISS-MODEL. Hasil: analisis penelitian menunjukkan protein target dan template memiliki identity 95,29 % dan tersusun dari 297 asam amino dengan nilai QMEAN -2,15. Protein struktural VP1 pada Ramachandran Plots memiliki struktur stabil, residu non-glisin pada daerah outlier hanya berkisar 0,34 % (A53 ALA) dengan Nilai rotamer outliers 1,61 %. Kesimpulan: Model struktur tiga dimensi protein yang diteliti memiliki struktur stabil dan informasi yang didapatkan berguna untuk penelitian lebih lanjut dalam pengembangan vaksin penyakit yang disebabkan oleh EV-A71.
Variasi Morfometrik Tetragonula laeviceps di Berbagai Habitat di Provinsi Sulawesi Tengah I Made Budiarsa; Fatmah Dhafir; Manap Trianto
BIOEDUSCIENCE Vol 6 No 2 (2022): BIOEDUSCIENCE
Publisher : Universitas Muhammadiyah Prof. Dr. Hamka

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22236/j.bes/625062

Abstract

Background: Habitat is a place for living things to grow and develop. Differences in habitat in an area can affect the size of an organism. This study aims to determine the morphometric variations of Tetragonula laeviceps found in urban and forest habitats in Central Sulawesi Province. Methods: This research was conducted with roaming technique. Morphometric characters observed were 35 characters of stingless bee and analyzed using Microsoft Excel software. Results: The results of this study indicated that the morphometric size variation of T. laeviceps found in forest habitats (3.58 mm) is greater than that of wild bee in urban habitats (3.05 mm). Conclusions: Different habitat characteristics can affect the morphometry variations of the bee, especially in T. laeviceps species. The bee's morphometry body size is greater than in the forest habitat, because in that habitat there are environmental temperatures and types of plant sources of nectar which are more supportive for bee life compared to urban habitats.
Struktur 3D Protein Struktural VP1 pada Enterovirus A71 Menggunakan Swiss-Model Suprianto Suprianto; Made Budiarsa; Fatmah Dhafir
BIOEDUSCIENCE Vol 4 No 1 (2020): BIOEDUSCIENCE
Publisher : Universitas Muhammadiyah Prof. Dr. Hamka

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.29405/j.bes/4137-474353

Abstract

Background: Protein struktural VP1 berperan sebagai pemain kunci dalam patogenesis, memiliki keunikan yang cukup menarik untuk dikaji dengan mempelajari sifat dan fungsi protein struktural VP1. Penelitian ini bertujuan untuk memprediksi struktur tiga dimensi protein VP1 pada EV-A71. Metode: Protein target diperoleh dari server UniProt dengan kode akses A0A097EV89 menggunakan template 4cey.1.A (PDB ID) dianalisis secara in silico melalui metode homologi menggunakan server SWISS-MODEL. Hasil: analisis penelitian menunjukkan protein target dan template memiliki identity 95,29 % dan tersusun dari 297 asam amino dengan nilai QMEAN -2,15. Protein struktural VP1 pada Ramachandran Plots memiliki struktur stabil, residu non-glisin pada daerah outlier hanya berkisar 0,34 % (A53 ALA) dengan Nilai rotamer outliers 1,61 %. Kesimpulan: Model struktur tiga dimensi protein yang diteliti memiliki struktur stabil dan informasi yang didapatkan berguna untuk penelitian lebih lanjut dalam pengembangan vaksin penyakit yang disebabkan oleh EV-A71.
Variasi Morfometrik Tetragonula laeviceps di Berbagai Habitat di Provinsi Sulawesi Tengah I Made Budiarsa; Fatmah Dhafir; Manap Trianto
BIOEDUSCIENCE Vol 6 No 2 (2022): BIOEDUSCIENCE
Publisher : Universitas Muhammadiyah Prof. Dr. Hamka

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.22236/j.bes/625062

Abstract

Background: Habitat is a place for living things to grow and develop. Differences in habitat in an area can affect the size of an organism. This study aims to determine the morphometric variations of Tetragonula laeviceps found in urban and forest habitats in Central Sulawesi Province. Methods: This research was conducted with roaming technique. Morphometric characters observed were 35 characters of stingless bee and analyzed using Microsoft Excel software. Results: The results of this study indicated that the morphometric size variation of T. laeviceps found in forest habitats (3.58 mm) is greater than that of wild bee in urban habitats (3.05 mm). Conclusions: Different habitat characteristics can affect the morphometry variations of the bee, especially in T. laeviceps species. The bee's morphometry body size is greater than in the forest habitat, because in that habitat there are environmental temperatures and types of plant sources of nectar which are more supportive for bee life compared to urban habitats.
Co-Authors Abd Hakim Laenggeng, Abd Hakim Abd Rauf Abd. Hakim Laenggeng, Abd. Hakim Abd. Rauf Abdul Hakim Achmad - Ramadhan, Achmad - Achmad Ramadhan Achmad Ramadhan Achmad, Mestawaty As. Agustin Tiwow Amalia Buntu Amiruddin Kasim Amran Rede Amran Rede Andi Mamas Andi Tanra Tellu Annisa, Rezky Artha, Fandy Ashari, Abdul Ayu Rifka Ramadani Burhan Burhan, Burhan Bustamin Bustamin Bustamin Bustamin Bustamin Bustamin D, Mutiara Datubaringan, Jein David Pebriyanto Tulak Dawa, Linda M Delima, Nur Dewi Tureni Erna, Ni Kadek Fadhilah Fadhilah Faradila, Ratna Febriawan, Aan Firga Feliana, Firga Gamar Binti Non Shamdas Hadijah S. Pago Hj. Musdalifah Nurdin I Ketut Suada I Made Budiarsa I Nengah Kundera Illah, Ininna Nur Isnainar Isnainar Isninar, Isnainar Kaltisa, Kaltisa Laksono Trisnantoro Latompai, Nismawati I. Lilies Lusiana - - Manap Trianto Manap Trianto MARIA BINTANG Maria Ulpa Djuanda Masriani . Masrianih Mestawaty As. Achmad Mestawaty Mestawaty Minarni Rama Jura Moh Dhuhri Surya Wirawan Mohammad Jamhari Murnadi, Ni Kade Mursito S. Bialangi Musdayanti Musdayanti Najma AR. Talamoa Nismawati I. Latompai Novriadi Novriadi Nur Hikmah Nursam Nursam Nurwahda, Nurwahda Permatasari, Ni Kadek Dewi Puspitasari, Amira Putri, Adelia Putri, Aticha Anata Rafiqa RAFIQA RAFIQA, RAFIQA Rahmadhani, Lili Ratnawathi, Ni Wayan Raya Agni Rezkiana, Sry Ayu Safitri, Gusti Ayu Kadek Yunita Samsurizal, M. Sulaeman Silvia Agustin Sitti Nur Fadhilah Suardi, Magfira SULFIANTI, SULFIANTI Suprianto Suprianto Suprianto Suprianto Suprianto Sutrisna Sutrisna Sutrisnawati Mardin Syaifuloh, Syaifullah Syech Zainal Tulak, David Pebriyanto Windarsih, Yulia Yusril Ihza Mahendra Yusril Ihza Mahendra Zulkaidah - -, Zulkaidah -