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All Journal HAYATI Journal of Biosciences Journal of Tropical Life Science : International Journal of Theoretical, Experimental, and Applied Life Sciences Agrotrop : Journal on Agriculture Science METAMORFOSA Journal of Biological Sciences Buletin Udayana Mengabdi Itepa : Jurnal Ilmu dan Teknologi Pangan Jurnal Veteriner Jurnal Biologi Udayana Bumi Lestari Ecotrophic, Journal of Environmental Science Jurnal Bios Logos Saintek Perikanan : Indonesian Journal of Fisheries Science and Technology BIOTROPIA - The Southeast Asian Journal of Tropical Biology SIMBIOSIS Agrointek Biotropika Jurnal Biosains Pascasarjana Jurnal Biologi Universitas Andalas Biota ANDHARUPA REINWARDTIA Majalah Ilmiah Biologi BIOSFERA: A Scientific Journal Floribunda Advances in Tropical Biodiversity and Environmental Sciences Jurnal Aplikasi dan Inovasi Iptek (JASINTEK) Indigenous Biologi BIO-CONS: Jurnal Biologi dan Konservasi Journal of Natural Sciences BIO-CONS: Jurnal Biologi dan Konservasi Reinwardtia

MADE PHARMAWATI

Program Studi Biologi, Fakultas Matematika Dan Ilmu Pengetahuan Alam, Universitas Udayana

Author-ID : 342462

Agriculture, Biological Sciences & Forestry Arts Humanities Biochemistry, Genetics & Molecular Biology Decision Sciences, Operations Research & Management Dentistry Earth & Planetary Sciences Economics, Econometrics & Finance Education Energy Environmental Science Health Professions Immunology & microbiology Languange, Linguistic, Communication & Media Materials Science & Nanotechnology Medicine & Pharmacology Veterinary Other

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PEMILIHAN PRIMER RAPD (RANDOM AMPLIFIED POLYMORPHIC DNA) PADA PCR (POLYMERASE CHAIN REACTION) TANAMAN KAMBOJA (Plumeria sp.) Vanesa Martida; Made Pharmawati
SIMBIOSIS Vol 4, No 1 (2016)
Publisher : Jurusan Biologi Universitas Udayana

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (298.699 KB)

There are many variation of Plumeria sp. that grown in Bali. The genetic identity of Plumeria sp. need to be analysedusing molecular study for plant breeding purpose. DNA extraction and primer selection are basic steps for molecular studyespecially in identification and analysis of genetic diversity. The aim of this research was to determine RAPD primerssuitable for molecular analysis of Plumeria sp. This research used CTAB method with modification for DNA extraction. Thesamples were young leaves of Plumeria sp. dried using silica gel. The primers used were produced by University of BritishColumbia and Operon Primer Technology. The results showed that DNA concentration of Plumeria sp from dried leaves wasbetween 33-267 ng/?l. Out of seven primers tested, three primers UBC-127, UBC-250, and OPH-06 produced clear andscorable amplification products for further analyses.Keywords: DNA, Plumeria sp., RAPD primer

JENIS-JENIS LAMUN DI PANTAI LEMBONGAN, NUSA LEMBONGAN DAN ANALISISNYA DENGAN PCR RUAS rbcL Maliza Kurnia; Made Pharmawati; Deny S. Yusup
SIMBIOSIS Vol 3 No 2 (2015)
Publisher : Jurusan Biologi Universitas Udayana

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (140.178 KB)

Seagrasses in Bali are distributed on coastal areas of south east Bali coastal waters of Nusa Dua, Serangan Island,Sanur Beach and beaches in Nusa Lembongan. In Bali, it has been reported that there are eight species of seagrasses. Thisresearch aimed to identify seagrass species on Lembongan Beach based on morphological characters and optimize PCRcondition for molecular analysis. This research is a preliminary research on molecular method for seagrass analysis. Seagrasssampling was conducted in Lembongan Beach (in front of Ketut’s Losmen) in Nusa Lembongan, Nusa Penida Subdistrict,Bali Province. DNA extraction method used was the method of Doyle and Doyle with modifications. Result showed thatthere are five species found in Lembongan Beach, Nusa Lembongan. These seagrass are Cymodocea rotundata, Enhalusacoroides, Halodule pinifolia, Thalassodendron ciliatum and Thalassia hemprichii. DNA extraction resulted in high size ofDNA and smear DNA. Optimation of PCR reaction of rbcL fragment was done at DNA concentration of 30 ng and 50 ng.The electrophoresisof PCR products showed that DNA concentration of 50 ng had thicker band than concentration of 30 ng.Keywords: DNA extraction, Morphology, PCR rbcL, Seagrass

EKSTRAKSI DNA DARI SIKAT GIGI BERDASARKAN LAMA PEMAKAIAN DAN LAMA PENYIMPANAN SETELAH DIPAKAI Agriani Dewinta; I Ketut Junitha; Made Pharmawati
SIMBIOSIS Vol 10 No 1 (2022)
Publisher : Jurusan Biologi Universitas Udayana

In recent years in Indonesia there have been frequent disasters, including natural disasters, non-natural disasters, and social disasters that have resulted in many casualties. The identification process of victims who have experienced natural disasters, non-natural disasters, and social disasters often uses DNA. The primary identification method commonly used in DVI is DNA. Disaster Victim Identification (DVI) is a procedure for identifying victims who died from a mass disaster that can be scientifically accounted for and refers to the Interpol standard. Sources of DNA data consist of primary and secondary data sources. Toothbrush is a secondary source of DNA data. Toothbrush is commonly used as a source of comparative DNA samples selected in cases of identification of dead victims without a family as a comparison. In this study, it was shown that the time of use and the part of the toothbrush had no significant effect (P> 0.01) on the amount of DNA. The results of the quality test using gel electrophoresis were only 7 samples, namely 2b, 3a, 10a, 10b, 11a, 11b, 12b which showed that there was a thin band of luminescence and DNA smears. PCR-RAPD test was performed to test the extracted DNA could be amplified. PCR-RAPD results from 12 DNA samples, 7 samples were successfully amplified, indicating that the DNA extracted from a toothbrush could be amplified.

MOLECULAR PHYLOGENY OF MAIDENHAIR FERN GENUS ADIANTUM (PTERIDACEAE) FROM LESSER SUNDA ISLANDS INDONESIA BASED ON RBCL AND TRNL-F Wenni Setyo Lestari; Bayu Adjie; Tassanai Jaruwatanaphan; Yasuyuki Watano; Made Pharmawati
REINWARDTIA Vol 14, No 1 (2014): Vol. 14 No. 1
Publisher : Research Center for Biology

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.14203/reinwardtia.v14i1.409

The Lesser Sunda Islands of Indonesia are composed of small islands scattered from Bali to Timor Island. We analyzed a molecular phylogeny of Adiantum collected from Lesser Sunda Islands to reveal its phylogenetic relationships. A total of 12 species of Adiantum from this region and seven species from Java Island were collected and used in this study. Two cpDNA regions (rbcL and trnL-F) were chosen as markers and phylogenetic analyses were conducted using Neighbour-Joining (NJ) and Maximum Parsimony (MP) methods. The tree topologies reconstructed by NJ and MP from specimens used in this study and other species downloaded from GenBank are congruent in which trees are divided into five major clades. Adiantum species of Lesser Sunda Islands are not monophyletic and comprises three clades, i. e. Clade I composed of A. hispidulum group, Clade III composed of A. peruvianum group and Clade IV or A. caudatum group, each together with extra-Lesser Sunda samples. No sample from Lesser Sunda Islands examined is located in Clade II (A. tenerum group) and V (A. capillus-veneris group).

PEMBENTUKAN KALUS, TUNAS DAN AKAR PADA KULTUR ANGGUR BALI (Vitis vinifera cv Alphonse Lavallee) DENGAN PEMBERIAN NAA dan BAP Made Pharmawati; Made Ria Defiani
BIO-CONS : Jurnal Biologi dan Konservasi Vol 3 No 1 (2021): BIO-CONS: Jurnal Biologi dan Konservasi
Publisher : PROGRAM STUDI PENDIDIKAN BIOLOGI

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.31537/biocons.v3i1.432

Anggur Bali (Vitis vinifera L. cv Alphonse Lavallee) merupakan salah satu tanaman buah yang banyak dibudidayakan di Kabupaten Buleleng, Bali. Kebutuhan akan bibit anggur Bali cukup tinggi, sehingga diperlukan teknik perbanyakan yang dapat menghasilkan bibit dalam jumlah besar. Salah satu teknik yang dapat digunakan adalah kultur jaringan tanaman. Penelitian ini bertujuan menganalisis respon eksplan cabang yang masih muda terhadap zat pengatur tumbuh (ZPT) NAA dan BAP pada kultur Anggur Bali. Cabang tanaman anggur yang masih muda diambil dari salah satu perkebunan Anggur Bali di Kecamatan Seririt, Kabupaten Buleleng, Bali. Dilakukan sterilisasi eksplan dan ditanam pada medium MS dengan penambahan zat pengatur tumbuh NAA dan BAP dalam beberapa kombinasi. Pengamatan dilakukan terhadap pembentukan kalus, tunas dan akar. Hasil menunjukkan bahwa pembentukan kalus, tunas dan akar Anggur Bali dengan teknik kultur jaringan dipengaruhi oleh zat pengatur tumbuh NAA dan BAP. Persentase tertinggi kultur yang membentuk kalus terjadi pada penambahan 1,5 mg/L NAA dan 2 mg/L BAP, tetapi skor kalus yang terbentuk tertinggi pada kombinasi 1 mg/L NAA dengan 4 mg/L BAP dan kombinasi 1,5 mg/L NAA dengan 4 mg/L BAP. Tunas terbentuk pada perlakuan 4 mg/L BAP tanpa NAA dan perlakuan 1 mg/L NAA dengan 4 mg/l BAP. Persentase kultur yang membentuk akar dan jumlah akar terbanyak terjadi pada pemberian kombinasi 1 mg/L NAA dengan 2 mg/L BAP. Perubahan kecil pada konsentrasi ZPT mengakibatkan perubahan respon tanaman, sehingga penelitian lebih lanjut diperlukan untuk mendapatkan kombinasi dan konsentrasi ZPT yang tepat untuk menghasilkan plantlet dalam jumlah besar.

Penggandaan Kromosom Marigold (Tagetes erecta L.) dengan Perlakuan Kolkisin Ida Ayu Ratih Purnama Dewi; Made Pharmawati
Majalah Ilmiah Biologi BIOSFERA: A Scientific Journal Vol 35, No 3 (2018)
Publisher : Fakultas Biologi | Universitas Jenderal Soedirman

Show Abstract | Download Original | Original Source | Check in Google Scholar | DOI: 10.20884/1.mib.2018.35.3.773

Penelitian ini bertujuan untuk menganalisis pengaruh pemberian kolkisin terhadap jumlah kromosom marigold serta dapat mengetahui konsentrasi kolkisin yang efektif untuk menginduksi poliploidi pada kecambah marigold. Kecambah diberi direndam dalam kolkisin dengan konsentrasi 0,1% dan 0,2% selama 6 jam Sebagai kontrol digunakan akuades. Parameter yang diamati adalah jumlah kromosom ujung akar marigold pada masing-masing perlakuan. Pengamatan kromosom dilakukan dengan metode squash ujung akar. Pemberian kolkisin menyebabkan penggandaan jumlah kromosom kecambah marigold. Rata-rata jumlah kromosom kecambah marigold pada kontrol adalah 2n=2x=20,5, sementara rata-rata jumlah kromosom yang diberi perlakuan kolkisin 0,1% dan 0,2 % berturut-turut yaitu 2n=4x=42 dan 2n=4x=43.

Total Genomic DNA Extraction Studies from Seaweeds Wildan Mujahidul Basyar; Made Pharmawati; Ida Ayu Astarini
Advances in Tropical Biodiversity and Environmental Sciences Vol 4 No 1 (2020): ATBES
Publisher : Institute for Research and Community Services Udayana University

One of marine resources that has high value is seaweed. Seaweed is a carrageenan producer used in the food industry. Seaweed contains many minerals, vitamins and proteins that are useful for health. Carotenoids are pigments found in seaweed that function as antioxidants. The genes involved in carotenoid biosynthesis have been studied and provide opportunities for genetic improvement of seaweed. DNA is a basic requirement in molecular analysis. Therefore, a suitable method of DNA extraction from seaweed is needed. The aim of this research was to investigate DNA extraction method from several seaweed species and test the DNA quality through PCR-RAPD. Seaweed samples were collected from Pantai Bumi Perkemahan Taman Nasional Bali Barat and DNA was extracted using Doyle and Doyle’s method with modifications. PCR-RAPD was conducted using primer UBC127 and OPD 11 to test the quality of DNA. Results showed that 3 hours incubation in 60ºC had the best result of DNA extraction. However, the quality of DNA was low, as indicated by inconsistent PCR-RAPD products. Further optimization in DNA extraction is needed to obtain high quality DNA for genetic analysis.

Morphological and Anatomical Changes by Cochicine in Seedling of Impatiens balsamina L. Ni Made Sastriyani Wiendra; Made Pharmawati
Advances in Tropical Biodiversity and Environmental Sciences Vol 3 No 2 (2019): ATBES
Publisher : Institute for Research and Community Services Udayana University

Impatiens balsamina L. is a plant that is widely cultivated in Bali. The flower of this plant is used as a component of offering in Hindu religious ceremonies. The flower petals are thin and wilt easily, therefore genetic modification is needed to get better quality. This research aimed to study the effect of 0.01% colchicine with soaking periods of 4 hours, 8 hours, 12 hours and 24 hours to seedlings of I. balsamina. Seeds of I. balsamina were germinated and sprouted seeds were treated with 0.01% colchicine for 4 hours, 8 hours, 12 hours and 24 hours. The sprouted seeds were then transfer to polybag with soil media. The experiment was designed with randomized blok design with five replicates. Observations were done on plant height, length and width of leaf, stem diameter, number of stomata as well as observation on plant stem cortex cells. Results showed that colchicine reduced plant height at three weeks after planting, while plant stem diameter increased. Control plants had the smallest leaf length and width. The number of stomata decreased at plants derived from colchicine treated sprouted seeds and the lowest stomatal number observed was at soaking duration of 24 hours.

Comparison of DNA Yield from Different Plant Materials of Plumeria sp. (Apocynaceae) Vanesa Martida; Made Pharmawati
Advances in Tropical Biodiversity and Environmental Sciences Vol 3 No 1 (2019): ATBES
Publisher : Institute for Research and Community Services Udayana University

DNA extraction that gives good quantity and quality DNA is a basic step that must be completed for molecular studies, especially in DNA fingerprint imaging. The aim of this research was to find out the better quality and quantity of DNA extracted from different plant materials of frangipani cultivars (Plumeria sp.). Leaves and flowers were collected from Taman Jepun, Denpasar Bali. Fresh young leaves and flowers were used as plant materials as well as dried leaves (silica gel dried leaves) of Plumeria sp. This research used CTAB buffer with modification as lysis buffer. Purification techique used NucleoSpin® Gel and PCR Clean Up Kit. The results showed that the colour of DNA solution from fresh material was clear and the quantities of DNA from young fresh leaves were between 70-300 ng/µl. The DNA colour solution from flowers was also transparent with concentration between 0-40 ng/µl. DNA isolated from dry material resulted in brown solution with DNA quantity between 30-100 ng/µl and need to be purified to obtain clear DNA solution.

PENANAMAN DAN PEMANFAATAN TANAMAN OBAT KELUARGA SEBAGAI MINUMAN IMMUNE BOOSTER M. Pharmawati; L.P. Wrasiati; I.M.A.S. Wijaya; N.I. Wiratmini
Buletin Udayana Mengabdi Vol 21 No 3 (2022): Buletin Udayana Mengabdi
Publisher : Lembaga Penelitian dan Pengabdian kepada Masyarakat

The immune system is important in dealing with foreign objects that enter the body. A good body defense system is very important in the existence of the corona virus disease 19 (COVID-19) pandemic caused by the SARS-CoV2. The immune system can be improved by consuming foods with balanced nutrition and various kinds of herbs, in the form of herbal medicine. Jamu is a product derived from medicinal plants that can function as an immune booster. The government has campaigned for the planting of family medicinal plants (TOGA) as an effort to maintain health. In Budaga Village, Klungkung Regency, several families have planted medicinal plants, but the types of are still limited and the processing carried out is still very simple, namely brewing the leaves or plant rhizomes. The purpose of this activity was to introduce cultivation techniques of various kinds of medicinal plants, as well as to train member of PKK of Budaga Village in processing medicinal plants into herbal jamu immune booster. The activity was held on September 1, 2021, attended by representatives of PKK in Budaga Village. The methods used are lectures, demonstrations and direct practice of seeding and planting medicinal plants and practice of preparing jamu. The results of this activity are that the community can cultivate medicinal plants and able to prepare jamu following recipe from Kementerian Kesehatan RI. This activity produced seeds of medicinal plants ginger, red ginger, Piper betle, lemongrass, turmeric, mint and three herbal products, namely jamu gula asam, kunyit asam and temulawak. Keywords: Budaga Village, immune booster, jamu, PKK, TOGA

Co-Authors A. A. Putri Ardyanti A.A.S. A. Sukmaningsih Agriani Dewinta Anak Agung Ayu Putri Ardyanti Anak Agung Gde Raka Dalem Andi Bahtiar Batti Andrianus Sembiring, Andrianus Aziz, Alifya Ibnu Bayu Adjie Bayu Adjie Bayu Adjie Bram Setyadji Deny Suhermawan Yusup Dian Catur Prayantini Dwi Nur Rikhma Sari Eka Fibayani Imaniar Eka Fibayani Imaniar Ema Hendriyani Fransiska Nitti Fransiskus Jimmy Roga Gde Evayanti, Luh GUIJUN YAN Gusti Ayu Putri Arnila I Gde Suryadi I Gede Putu Ardhana I Gusti Agung Eka Saraswati I Gusti Ayu Agung Pradnya Paramitha I Gusti Ngurah Kade Mahardika I Ketut Catur Wiguna I Ketut Junitha I Ketut Suada I Komang Adi Widyastama I MADE AGUS WIARTANA I Made Anom Sutrisna Wijaya I Made Murna I Putu Agus Tirta Cahyana I Putu Satwika I Wayan Arnata I Wayan Rosiana I. Setyawati I.G.A.S. Wahyuni I.M.A.S. Wijaya IAN JAMES MACFARLANE IDA AYU ASTARINI Ida Ayu Ratih Purnama Dewi Imaniar, Eka Fibayani Indah Tria Hoky Inna Narayani IRIANI SETYAWATI Joko Raharjo, Sentot Junita Hardini Ketut Queena Fredlina Luh Putu Wrasiati Made Ria Defiani Maharani, Rai Janaki Maliza Kurnia Maya Agustina Maya Agustina Mery Wintari Ngurah Intan Wiratmini Ni Kadek Dewi Rustini NI KADEK YUNITA SARI Ni LUH ARPIWI Ni Luh Ayu Jami Wistiani, Ni Luh Ayu Jami Ni Luh Putu Agustini Ni Luh Watiniasih Ni Luh Wayan Yulia Mirayanti NI MADE DIAN PRATIWI Ni Made Gari Ni Made Sastriyani Wiendra Ni Made Sastriyani Wiendra Ni Made Suartin Ni Nyoman Wirasiti Ni Putu Adriani Astiti Ni Putu Eka Krisnayanti Ni Wayan Ayu Wiartini Ni Wayan Karolina Ni Wayan Sudatri PATRICK FINNEGAN Putera, I Kadek Aridena Putu Angga Wiradana Putu Apriliani Putu Yunita Putri Aryani Retno Kawuri Rifky Firmansyah Anwar Satwika, I Putu Septarini Dian Anitasari Septarini Dian Anitasari Siddique, Kadambot.H.M. Tassanai Jaruwatanaphan Tassanai Jaruwatanaphan Tassanai Jaruwatanaphan, Tassanai Tiwi Wati Uslan UUL SHOVI NURKAMILA Vanesa Martida Vanesa Martida Viryanando Evan Rahardja WAHYU WIDOWATI Wawan Sujarwo WENNI SETYO LESTARI Wenni Setyo Lestari Wenni Setyo Lestari, Wenni Setyo Wiguna, I Ketut Catur Wijaya, Putu Austin Widyasari Wildan Mujahidul Basyar Yasuyuki Watano Yasuyuki Watano Yasuyuki Watano, Yasuyuki Yenni Ciawi Zaetuna, Hanifa Laila

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