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All Journal Jurnal Ekonomi & Bisnis PNJ (JEKBIS PNJ) Berkala Ilmiah Pendidikan Biologi (BioEdu) Microbiology Indonesia Pharmaciana: Jurnal Kefarmasian Jurnal Media Wahana Ekonomika Jurnal Psikologi PUJANGGA: Jurnal Bahasa dan Sastra TARBAWI: Jurnal Pendidikan Agama Islam Jurnal Al-Qadau: Peradilan dan Hukum Keluarga Islam KOLEGIAL : Jurnal Manajemen, Bisnis, dan Akuntansi Medical Laboratory Technology Journal Jurnal Pendidikan Dasar JNKI (Jurnal Ners dan Kebidanan Indonesia) (Indonesian Journal of Nursing and Midwifery) Buletin Sumber Daya Geologi METHOMIKA: Jurnal Manajemen Informatika & Komputerisasi Akuntansi Jurnal Teknologi Pertanian Proceedings of the International Conference on Applied Science and Health Jurnal Pendidikan Almuslim YUME : Journal of Management Jurnal Ilmiah Mandala Education (JIME) Jurnal Biotek PROSIDING SEMINAR NASIONAL LEMBAGA PENELITIAN DAN PENDIDIKAN (LPP) MANDALA Ruhama : Islamic Education Journal Pena Literasi Social, Humanities, and Educational Studies (SHEs): Conference Series Industrial Engineering Journal (IEJ) Jurnal Ilmiah Kesehatan Jurnal Imam Bonjol : Kajian Ilmu Informasi dan Perpustakaan Joined Journal (Journal of Informatics Education JURNAL EDUKASI NONFORMAL Jurnal Kesehatan Pasak Bumi Kalimantan Budapest International Research and Critics Institute-Journal (BIRCI-Journal): Humanities and Social Sciences Jurnal Kajian Agama Hukum dan Pendidikan Islam (KAHPI) Jurnal Ilmiah komunikasi Jurnal Ilmiah Wahana Pendidikan Relativitas : Jurnal Riset Inovasi Pembelajaran Fisika Meukuta Alam : Jurnal Ilmiah Mahasiswa Archives of The Medicine and Case Reports Journal Peqguruang: Conference Series Schrodinger : Jurnal Ilmiah Mahasiswa Pendidikan Fisika Jurnal Teknologi Terapan and Sains 4.0 Addabana: Jurnal Pendidikan Agama Islam Cendekia: Jurnal Ilmu Sosial, Bahasa dan Pendidikan JURNAL TEKNIK INDUSTRI Prosiding Seminar Nasional Rekayasa Teknologi Industri dan Informasi ReTII Ta'rim: Jurnal Pendidikan dan Anak Usia Dini E-JRM Jurnal Manajemen Dan Bisnis Ekonomi Student Research Journal Jurnal Ilmiah Ekonomi dan Manajemen Jurnal Sains Student Research Aspirasi : Publikasi Hasil Pengabdian dan Kegiatan Masyarakat Prosiding Seminar Nasional dan Call For Paper Kebidanan Universitas Ngudi Waluyo Karunia: Jurnal Hasil Pengabdian Masyarakat Indonesia Jurnal Ilmiah Farmasi Simplisia Jurnal Akademik Pengabdian Masyarakat Mengabdi: Jurnal Hasil Kegiatan Bersama Masyarakat Kanun: Jurnal Ilmu Hukum Ardhi: Jurnal Pengabdian dalam Negri Akuntansi Pajak dan Kebijakan Ekonomi Digital Inovasi Pendidikan dan Anak Usia Dini
FATIMAH FATIMAH
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Journal : Microbiology Indonesia

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Diversity of Lactic Acid Bacteria Isolated from Indonesian Traditional Fermented Foods APON ZAENAL MUSTOPA; FATIMAH FATIMAH
Microbiology Indonesia Vol. 8 No. 2 (2014): June 2014
Publisher : Indonesian Society for microbiology

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (391.524 KB) | DOI: 10.5454/mi.8.2.2

Abstract

The diversity of lactic acid bacteria was evaluated from Indonesian fermented foods such as dadih (buffalo fermented milk), tempoyak (fermented durian), bekasam (fermented meat), and tape ketan (fermented glutinous rice). Lactic acid bacteria were enumerated using selective media and characterised based on a genotypic methods such as rep- PCR and RAPD-PCR, as well as 16S rRNA gene sequencing of representative strains. Forty-six colonies had successfullybeen isolated from Indonesian fermented foods. The great majority of these colonies originated from dadih (43.48%), tempoyak (39.13%), bekasam (13.04%) and tape (4,3%). The 46 isolates were characterised based on a genotypic methods such as RAPD and rep-PCR as well as 16S rRNA gene sequencing of representative strains. The rep-PCR result yielded seven clusters (I-VII) at a similarity level of 75-88% and RAPD-PCR used LB2 primer, M13 primer and primer A, B, C. The RAPD result using LB2 primer yielded eight clusters (I-VIII) at a similarity level of 82-91%. Identification using 16S rRNA showed that the majority strains as Lactobacillus plantarum, Lactobacillus fermentum and Pediococcus pentosaceus strains.
Identification and characterization of virulence factor of several Indonesian Xanthomonas oryzae pv. oryzae FATIMAH FATIMAH; APON ZAENAL MUSTOPA; IQBAL KUSNANDARSYAH
Microbiology Indonesia Vol. 8 No. 3 (2014): September 2014
Publisher : Indonesian Society for microbiology

Show Abstract | Download Original | Original Source | Check in Google Scholar | Full PDF (379.262 KB) | DOI: 10.5454/mi.8.3.3

Abstract

Xanthomonas oryzae pv. oryzae (Xoo) is the bacterial causative agent of leaf blight in rice (Oryza sativa L.), the most serious bacterial disease of rice in many rice growing areas worldwide. This study aimed to identify and characterize several virulence factors of seven Xoo isolates from Yogyakarta, West Java, and West Sumatera. The identification of Xoo using 16S rRNA confirmed high homology to Xanthomonas oryzae pv. oryzae PXO99A and revealed three groups. The first group was Xoo93229, the second group containing Xoo1110, Xoo1122, Xoo1130, Xoo7624 and Xoo8024 as the same cluster with PXO99A and the third group was KACC10331 and MAFF311018. The amounts of exopolysaccharide (EPS) and cellulase produced were varying depending on the Xoo isolates. The EPS were produced more by isolate Xoo1130, Xoo1122 and Xoo8024. All tested isolates revealed similar cellulase activity except for isolate Xoo8024. The pathogenicity assay among the Xoo isolate showed that all tested isolates were virulent except Xoo7624. The in planta assay revealed that the tested isolates have multiplied and continued increasing the population size except for Xoo1110 and Xoo7624. High yield of EPS, cellulase activity, more virulence, and increasing population size revealed from isolate Xoo1130 and Xoo1122.
Co-Authors Abd. Rasyid Syamsuri Abdul Majid Agung Rida Ilahi Agus Salim Agus Subagio Ahmad Syamsul Falah Akrom, Akrom Al Hussein Flowers Rizqi Alyatus Syifa Amanda Amelia Sari Amri Amri Anisa Gustia Ningsih Annisaa’ Nurmasari APON ZAENAL MUSTOPA Arisara Leksansern Arniah Arniah As'ad As'ad Asnidar Asnidar Asrid Juniar Ayu Khairani Azhari Ahmad Berwi Fazri Pamudi Candrika Evayanthy Hasibuan Christin Natalia Meiditasari Cut Julita Dedi Purnomo Defri Aroni Deri Apriliyani Diana Khairani Sofyan Dicky Ardianto Dita Safira Dwisafira Dwisafira Eka Rahmawati Endang Sulistyaniningsih Ernanda Saputri Eva Darnila Fadiyah Aprilia Fakhri Inayati Said, Fathia Fandhilah Fandhilah Fani Inka Prilia Fauziah Nasution Febrina Suci Hati Fil Isnaeni Fitriani Fitriani Gatot Murti Wibowo Guntur Trimulyono Hairani Ananda Putri Hasbi Wahyudi Herlitah Herlitah Hermina Sukmaningtyas Herning Dyah Kusuma Wijayanti Herwinda Kusuma Hilda Okta Variana Hilda Zahra Lubis Ijar Salna Ika Holpiana Sari Marbun Indah Lestari IQBAL KUSNANDARSYAH Ira Puspitasari Irawati Hi Malan Ivan Muhammad Agung Jamaludin Jamaludin Jamilah Jamilah Karyadi Karyadi Khadijah Khadijah Khalifa Humaira Laras Ayu Dita Leli Yanti Lili Rahmayanti lilisuryani Lis Suswati Lis Suswati Luh Putu Ratna Sundari Lu’lu Rahmadanti M Sayuti M Taufiq M. Nurdin Mahmud Basuki Maryana Maryana Meila Nur Syamsiani Mhd. Amar Adly Mirra Noor Milla Muhamad Ramli Muhammad Fadhli Ritonga Muhammad Ilyas Muhammad Ridwansyah Muhammad Rivai Muhammad Subhan MUHAMMAD SUBHAN Muhtar Tajuddin Nanik Lestariningsih Neli Husniawati Neni Susilaningsih Nordiansyah, Muhammad Novitasari, Rifni Nur Delima Lubis Nur Rizkiya Makhfiro Nasution Nur Rizkiya Makhfiro Nst Nur Sa’adah Nurulita Nurulita Nuslima Nuslima Omar Hendro Putriana Putriana Qodri, Muhammad Fatih Rahmalia Rahmalia Ratna Dewi Kartikasari Resty Habibah Hasibuan Retti Ninsix Rifki Sakinah Nompo Rika Nazwa Sabila Rina Hardianti Rizki Hamdan Saputra Rizky Sudrajat Ronny Malavia Mardani Rousyati Rousyati Rouzi , Kana Safrina RR. Ella Evrita Hestiandari Rusli Malli Ryan Aryani Sabariah Sabariah Salsa Nabila Santi Aulia Rahma Saprudin Saprudin Septina Septina Sherina Molek Siti Khairiyah Siti Zubaidah Sofi Imamah Banurea Sri Mawarni St. Syamsudduha Sugiyanto Sugiyanto Sukamto, Ika Sumiyarsi Suryono Suryono Susi Ernawati Syaiful Rachman Syamsiar, Syamsiar Tamaela, Josepha Mariana Tantio Fernando Tutut Yuliani Pertiwi Ujang Sumarwan Ulhaq, Muhammad Zia Vilman Sidik Wahyuni Siregar Welly Welly Yoyon Dwi Wahyono Yus’iran Yus’iran Yusliana Yusliana Zulfiani Zulfiani Zunaidah Zunaidah ZURAIDA ZURAIDA