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Journal : Jurnal Veteriner

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Genetic Polymorphisms of The Chicken Antiviral Mx Gene in A Variety of Indonesian Indigenous Chicken Breeds Sri Sulandari; Moch Syamsul Arifin Zein; Dwi Astuti; Tike Sartika
Jurnal Veteriner Vol 10 No 2 (2009)
Publisher : Faculty of Veterinary Medicine, Udayana University and Published in collaboration with the Indonesia Veterinarian Association

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Abstract

It has previously been demonstrated that a G/A Single Nucleotide Polymorphism (SNP) at nucleotideposition 1,892 of coding sequence of chicken Mx gene confers susceptibility/resistance to avian viral diseases.The aim of this study was to assess the geographical distribution of G/A alleles in relation to differentgenetic backgrounds of a wide range of chicken populations. Using Polymerase Chain Reaction- RestrictionFragment Length Polymorphism (PCR-RFLP) methods, 492 samples from 15 breeds of indigenous chickenpopulations from Java, Sumatera, Kalimantan and Sulawesi islands were genotyped. Allele and genotypefrequencies of each population were calculated. Deviations from Hardy-Weinberg equilibrium were testedand inbreeding coefficient FIS estimated. Overall, the susceptible allele G had a frequency of 37.27% whilethe resistant allele A had a corresponding frequency of 62.73%. No clear relation of the geographicaldistribution of the G/A alleles to genetic backgrounds was found. The distribution of this SNP acrosspopulations seems to be affected by genetic drift rather than selection.
Co-Authors Ade Nena Nurhasanah Adelia Aurelly Adina khasanah Agnes Megawati Agus Anggoro Sigit Agus Kundarmasno Ahmad Mukhlis Ahmad Rizki Aldi fadillah Alfina Handayani Alienra Davry Nanda Kadun MT Alwin Marakarmah Ami Nurhidayah Amy Estiati Ana Zumrotun Nisak Angrian Permana, Angrian Anis Fadhillah Setya Handayani Anita Salsabila Putri Anita Septiani Anna Rahmawati Annisa Maulana Majid Annisa Sabilla anny Rosiana Masitoh Aqna Arina Anjani ARDIANSYAH ARDIANSYAH Arif Setyo Upoyo Arini Eka Saputri Aryatik, Rani Asmira, Lili Asri Utami Atiqah Mutia Aulio Yuda Prasetya Aurora Oktaviani putri Hidayat Awal Fitriyana AYU WULANDARI B. Herawan Hayadi Beti Susanti Tarigan Bre Boli, Elisabet Buaton, Relita Bulan Purnamasari Cahyati Komalasari Catherine Putri Wulandari Cecep Ridwan Chishn Aladdin Achmad Choirul Prayoga Christian Arvi Alfian Christy Wattimena Cisilia Sundari Citra Anisa Tika Putri Crystin E Watunglawar Daimah Dianawati Daud Rizaludin Dea Meliana Debi Ari Setiawan Della Safitri Dera Andani Devia Islami, Annisa Deviana Nurul Sholekha Dewi Mas Arumsari Dewi Silvia Dian Rachmawati Afandi Dian Ramadhani Diana Noviyanti Dila Fitriana Paramita Djunijanti Peggie Dwi Linna Suswardany Dwi Nawang Dwi Rahmawati Eef syaifuloh Ega Juangga Eko Julianto Eko Muharudin El Fathia Raisya Qonitulhaq Elisabet Bre Boli Emilia Roza Erlangga Zulfi Jihad Setyagama Erna Anggraeni Euis Susanti Fadhila Destya Fatmawati Fahrani Almira Rizkya Haryanto Fahri Hidayat Fahrurozi Muarief Fatikhah, Hasna Aghnia Fatimah Fida Dyah Puspasari Frizka Mawar Mayssiana Fuji Pebrianti Furtasan Ali Yusuf Fuzi Febriani Gatot Gilang Permadi Hadiono, Abdi Fauji Hanifa Siti Azzahrah Hanura Kalistha Putri Heddy Julistiono Hendi Saryanto Ibnu Maryanto Ike Sri Wahyuni Ilham Rizqi Ariyandi Inayah Rahma Sari Indah Astuti Dewi Indah Micty Salsabila indah puspitasari Indah Puspitasari Indah Risnawati Indra Permana Indriyani Putri, Afifah Innez Indah Putri Intan Pratiwi Irma Erviana Sari Jumadi Jumadi Juni Mariati Simarmata Junita Riswati Jusmawati Jusmawati, Jusmawati Kanafi Kanafi Kapti Kapti Karma Saputra Khairanum Nasution Khoirun Henny Hidayah Kristiana Sri Utami Laora Windari Leina Rifqi Leni Nur Khafifah Lestari Diah Wulandari Lia Apriliani Lia Ardipa Lina Priliana Linda Okstiana Lionsy Sitanggang Lisa Permatasari Lisna Nur Rokhim Luthfi Nafisa Agustina M Mujirudin M. Alfin Jaza’ M. Amir Made Suandika Magdalena Simanjuntak Maharadatunkamsi (Maharadatunkamsi) Mariah Ulfah Masodi Masodi Maura Putri Alicia Maya Atsfiatun mendrofa, hendry kiswanto Metia Septiani Miftah Hermansyah Miftah Setiani Milawati Dewi Minsih Mira Fitriana Moch Syamsul Arifin Zein Monica Evriliani Muhammad agung Muhammad Ali Setiawan Muhammad Ilhan Muhammad Khoerur Rizki Muhammad Sabil Ahror Mujiharja Mujiharja mutia salma Mutmainah, Sevia N, Kevin Sigit Dwi N.Lara Santi Nabila Sasi Kirani Nadine Eliana Christian Nahar Cahyandaru Nahayatul Nofus Nanda Cindi Dwi Karisma nasihhudin - - Nasriyah, Nasriyah Nasya Anisyah Lerian Niken Risma Astika Nilam Ayuningtyas Nofendri, Yos Noor Cholifah Nova Angelia Kusuma Wardani Nova Sari Novi Lisdayanti Novia Fachza Nugroho, Arif Widodo Nur Anisa Nur Diantini Nur Rafif Sakti Pratama Nur Saran Nurhasanah Nurwidia, Lusiana Oktarina Heriyani Oktaviani Putri Lestari Oktliana Pasangka Ovi Sakti Cahyaningtyas Panji Erlangga Panji Prasetio Pitri Ani Plora Pasaribu Pramudia Rahmawati, Putri Priska Emannuela Kusuma Priyatin Sulistiowati Priyatin Sulistyowati Priyono Priyono Putri Desika Sari Raden Ahmad Syailendra Ragil Setyorini Rahmat Nurjaman Randa Septi Harmona Raras Wardah Kartika Wati Rasika Refa Teja Muti Rendi Ary Syarifuddin Rendi Marko Melandri Retno Indriyani Revangga Rezania Asyfiradayati Rina Sonia Risa Yanuar Erika Putri Riska Dwi Handayani Riska Widya Astuti Risnawati Risnawati Rivaldi Aditiya Rizal Maryanto Rizka Fitri Ramadanty Rizka Hidayati Rizkia Lisma Melinda Rony, Zahara Tussoleha Ropik Tri Wianto Rosita Ginting Rudiyanto Rudiyanto Saginata Adirama, Dyo Salsa afisha Salsabila Anindya Putri Samuel Ginting Sarah Mumtazah Sari, Rycha Kuwara Sartini Sartini Satrio Wijamukti Satya Nugroho Seila Insania Selpia Hendawani Sihombing Septian Bagus Triatmojo Shafira Anggraeni Kismanto Shelvy Shaylina Sherly Febryana Shifa Awalina A Shyreen A, Nazwa Sinta Istamarina Siti Mahmudah Siti N. Priyono Siti Nur Annisa Siti Nurkomalasari Sofiaturohmah, Alis Sofiyatun Hasanah Sri Darnoto sri karyati Sri Sulandari Sudiarto Sukasno Sukasno Supardi - Suratsih Suratsih Suwandi Suwandi Suwarni Suwarni Syahrul Syahwa Wulandari, Intan Syatriawati Suhaimi TARUNI SRI PRAWAST MIEN KAOMINI ANY ARYANI DEDY DURYADI SOLIHIN Tarwaka Tarwaka Tati Hartati Tia Apriliani TIKE SARTIKA Tophan Heri Wibowo Tri Ahliwantiningrum Tri Sumarni Trisnadi Kholiq Triyani Uchi Mely Viani Udin Solehudina Vina Rachmawati Virgin Junio Arizona Virly Kania Puteri Vitria Ramdoni Wahyu Purbo Juwono Wilda Wahyuni Siregar Wina Yuliana Wini Yuliani Wiwik Priyatin Wulan Ayu Sulistiawati WULANDARI Yoga Aditya yulisetyaningrum yulisetyaningrum Yuni Saputri Maulidiyah Yusi Yulianiza Yusuf Wahyu Setiya Putra Zaenal Fanani Zahra Hafid Kirana Zulfa Laila Khoirun Nisa Zulfa, Siti Ani Zusana A. Sasarari